PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022154435.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family GRAS
Protein Properties Length: 575aa    MW: 64287.6 Da    PI: 4.6944
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022154435.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS434.29.6e-1332065752374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                     ++ LlecA a+s+++  +a+a++++l+ ++s +gdp qR+aay++e+Laar+++s++ lykal+++e +   ss++laa+++++ev+P++kf+++
  XP_022154435.1 206 RQMLLECASAISEQNIGEASAMIEQLRGMVSVQGDPSQRIAAYMVEGLAARILESGKCLYKALRCKEPP---SSDRLAAMQILFEVCPCFKFGFM 297
                     689*****************************************************************9...9********************** PP

            GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledl 189
                     +aN aI ea++ e+r+Hi+Dfd+sqG+Q++ L+q La++p++pp+lR+Tgv++pes+      l+++g+rL+++A++l+vpfef++ +a++ +d+
  XP_022154435.1 298 AANCAIIEAAKDEKRIHIVDFDVSQGTQYIKLIQMLATQPGKPPHLRLTGVDDPESVqrPVGGLRHIGQRLEQLAKALRVPFEFRA-IASNASDV 391
                     *******************************************************99888899***********************.7******* PP

            GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerik 284
                     ++++L+ +pgEal+Vn+++ lh+++desvs+ + rd++L++vksl+Pk+v+vveq+++ n+++F++rf+e+ +yysa++dsl+a+lpr+s++ri+
  XP_022154435.1 392 TPSMLASRPGEALIVNFAFLLHHMPDESVSTVNLRDRLLRMVKSLNPKLVTVVEQDMNANTTPFFARFVETYKYYSAIYDSLDATLPRDSQDRIN 486
                     *********************************************************************************************** PP

            GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     vEr++l+++ivn+vaceg++r+er e ++kWr+r+++aGF++ ++se++++ ++ l++++ ++ +++ +e g++ +gW++++Lv++SaWr
  XP_022154435.1 487 VERQCLAKDIVNIVACEGEDRVERYEVAGKWRARMMMAGFTSCSMSENVTDPIRKLVEEYCDR-FKMYDEMGTIHFGWEEKSLVVTSAWR 575
                     *************************************************************66.*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 575 aa     Download sequence    
MSLVRPSDPS PLSYGSRKLY SLKGTKNAPD LSNQTFGSDK NRTMYMNDSY CSENYEKYFL  60
NFPIEELSIS GISTNSFHPD AASFGLRADS LSPLSGSFTI FDAYQSNSES ACLESTSPEA  120
LDFEDDQVRL KLQELERDLL GDPDAADYED VIFANGQSME IDSEWANSIR DALLHDSPKE  180
SSSTDSNFST ISSNKDASQI SSLNPRQMLL ECASAISEQN IGEASAMIEQ LRGMVSVQGD  240
PSQRIAAYMV EGLAARILES GKCLYKALRC KEPPSSDRLA AMQILFEVCP CFKFGFMAAN  300
CAIIEAAKDE KRIHIVDFDV SQGTQYIKLI QMLATQPGKP PHLRLTGVDD PESVQRPVGG  360
LRHIGQRLEQ LAKALRVPFE FRAIASNASD VTPSMLASRP GEALIVNFAF LLHHMPDESV  420
STVNLRDRLL RMVKSLNPKL VTVVEQDMNA NTTPFFARFV ETYKYYSAIY DSLDATLPRD  480
SQDRINVERQ CLAKDIVNIV ACEGEDRVER YEVAGKWRAR MMMAGFTSCS MSENVTDPIR  540
KLVEEYCDRF KMYDEMGTIH FGWEEKSLVV TSAWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21450.10.0GRAS family protein