PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022154358.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family NF-YA
Protein Properties Length: 271aa    MW: 29711.7 Da    PI: 6.6777
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022154358.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA101.29.7e-32174230158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     ++p++VNaKQyq+Il+RRq+Rak+e+ekkl +k+rkpylheSRh+hA+rR RgsgGrF
  XP_022154358.1 174 QDPVFVNAKQYQGILRRRQARAKAEAEKKL-IKARKPYLHESRHQHAIRRTRGSGGRF 230
                     58****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MQSKSETNNQ LESDPNGAPS TSLYYEPWWR GIGYNPIPLP VVGGNVSSST SLEFPNGGSE  60
SNDGQSVSNN DLNDEEDDVT KEVQATGSPH SAGSYRLDAQ KMQHVSSTLP AMHGECPTQS  120
TQLELVGHSI ACASNPYQDP YYGGMMAFYG HQPLGYPMVG APHARMPLPI EIAQDPVFVN  180
AKQYQGILRR RQARAKAEAE KKLIKARKPY LHESRHQHAI RRTRGSGGRF AKKDEANENE  240
MHSDKANESG YCLNDGSEQR NGSSSMNKAS Q
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12840.13e-57NF-YA family protein