PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022154304.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | C3H | ||||||||
Protein Properties | Length: 164aa MW: 18624.7 Da PI: 9.4767 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 37.2 | 5e-12 | 3 | 26 | 1 | 25 |
--S---SGGGGTS--TTTTT-SS-S CS zf-CCCH 1 yktelCrffartGtCkyGdrCkFaH 25 yk lCr+f+r G CkyG+rC+++H XP_022154304.1 3 YKKDLCRNFQR-GSCKYGERCRYIH 26 99*********.************* PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 164 aa Download sequence |
MQYKKDLCRN FQRGSCKYGE RCRYIHATQQ PQNSGSFGFG MQTSSQHQQK PNPFGFGVHS 60 TGQSKAAADF GSKQNQYKPF ENKWTRSSTP SGNAPSQKSD NQPPSANHKC TDGESCKCQI 120 VEDFQNERPL WKLTCYGHSK RNLESLFEYN FFKIASKIAS KDCI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75340.1 | 1e-34 | C3H family protein |