PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022154142.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | MYB | ||||||||
Protein Properties | Length: 261aa MW: 30141.3 Da PI: 8.6635 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 44 | 5e-14 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd +l + + G ++W+++++ g+ R++k+c++rw +yl XP_022154142.1 14 RGPWTVEEDHKLMNFILNNGIHCWRLVPKLAGLLRCGKSCRLRWINYL 61 89******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 56.2 | 8.1e-18 | 67 | 110 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg++T+ E+ ++++++ +lG++ W++Ia++++ gRt++++k++w++ XP_022154142.1 67 RGAFTEMEENQIIHLHSLLGNR-WSKIAAHFP-GRTDNEIKNHWNT 110 89********************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence |
MGRQPCCDKV GLKRGPWTVE EDHKLMNFIL NNGIHCWRLV PKLAGLLRCG KSCRLRWINY 60 LRPDLKRGAF TEMEENQIIH LHSLLGNRWS KIAAHFPGRT DNEIKNHWNT RIKKRLKQLG 120 LDPLTHKKLT DKTDHRVKEK LFIASNPLRK QEAMPNFDFE TKEKNPFAAH MMSDGSSNLA 180 CKGFGYGKWT DQLENDMSFS FEYCSSSSES LSIIKENSLH FDGLDSLPSW DDGVPKFNQL 240 EEDDVYSLGN GNGYYINTFS R |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G14340.1 | 3e-82 | MYB family protein |