PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022153451.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

AP2

Protein Properties

Length: 415aa MW: 46126.8 Da PI: 7.7776

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022153451.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	49.6	9.7e-16	179	238	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d + g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_022153451.1 179 SQYRGVTRHRWTGRYEAHLWDnSCRkEGqtRKgRQVYLGGYDKEEKAARAYDLAALKYWG 238 78*****************655454478446***********************98 PP
2	AP2	47.1	6.1e-15	283	332	3	55
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g XP_022153451.1 283 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 332 9*************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 415 aa Download sequence
DGSLCIDAAA HDWRSYENGE EESPKLEDFL GNCYSNSPPN DQGRGGGYCT QNPEQQQQTH 60 NNNNTFIQPN NNNNNNNNNS NSNYNYDCQA DHQTLIPNNN NAIYKSWLGP TPSAENECGF 120 QSLSLGMSPT SINDIASLPS PPPLAADSRK RPVAVAVAKP LLKEPVPRKS IDTFGQRTSQ 180 YRGVTRHRWT GRYEAHLWDN SCRKEGQTRK GRQVYLGGYD KEEKAARAYD LAALKYWGPT 240 THINFPLSSY ENELEEMKNM TRQEFVANLR RKSSGFSRGA SMYRGVTRHH QHGRWQARIG 300 RVAGNKDLYL GTFSTQEEAA EAYDIAAIKF RGTSAVTNFD IGRYDVKRIC SSSTLIAGGL 360 AKRSPLKDGT LSTTEDYTAC ASPSSSQPLL AIAGDGSAES HNELADMVWF ILFNK

Sequence ? help Back to Top

Protein Sequence Length: 415 aa Download sequence

DGSLCIDAAA HDWRSYENGE EESPKLEDFL GNCYSNSPPN DQGRGGGYCT QNPEQQQQTH  60
NNNNTFIQPN NNNNNNNNNS NSNYNYDCQA DHQTLIPNNN NAIYKSWLGP TPSAENECGF  120
QSLSLGMSPT SINDIASLPS PPPLAADSRK RPVAVAVAKP LLKEPVPRKS IDTFGQRTSQ  180
YRGVTRHRWT GRYEAHLWDN SCRKEGQTRK GRQVYLGGYD KEEKAARAYD LAALKYWGPT  240
THINFPLSSY ENELEEMKNM TRQEFVANLR RKSSGFSRGA SMYRGVTRHH QHGRWQARIG  300
RVAGNKDLYL GTFSTQEEAA EAYDIAAIKF RGTSAVTNFD IGRYDVKRIC SSSTLIAGGL  360
AKRSPLKDGT LSTTEDYTAC ASPSSSQPLL AIAGDGSAES HNELADMVWF ILFNK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72570.1	1e-129	AP2 family protein