PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022152933.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB_related

Protein Properties

Length: 507aa MW: 56740.3 Da PI: 7.5162

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022152933.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.6	6.1e-08	384	432	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 +WT E +lv++v ++G g+W+ I r +Rt ++k++w+++l XP_022152933.1 384 SWTLSEVMKLVEGVSEYGVGRWTEIKRLQFsssSHRTSVDLKDKWRNLL 432 5**********************876558999***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 507 aa Download sequence
MNAASKETMM TSNQTTKMFT YEFPDVDSDL SIFPVPEEDV LGVEHFLEPD FNKCFSGSVL 60 DFNTFHSHKC LSIENFSFAV EFDQIKIDSE SLHSSLTLEG ERTKQEDHDE KSQGTDDVVC 120 SGINKLPATV KSQTADDIFN LAPGSCNASF LGNVNFGSYS QGHDVAFSQN EGKLMISSRT 180 GSSGCSGSST ACLDDENMSD DRPMKRKRLS SCDSSKTGSE LNESKIIPFH EGNKVDTLVT 240 EKRLRKPPRR YSEESIEQKS RSTIKKSAHK ASKDKSLPSE SHRQNHCQKK LKAAPIIHKD 300 KSFNGGCIQV PFGLPIEEGQ VHSAKKRTCW DSEGMKDNRI LCIKDKNDVE SYSAESEDEN 360 TEDECITKGN NTQKGSSRRK HHISWTLSEV MKLVEGVSEY GVGRWTEIKR LQFSSSSHRT 420 SVDLKDKWRN LLKASDTQLQ NRRKVVLGRK QASQQVPESV LRRVRELAAI YPYPRENKSK 480 ESCSSSAPST SSFKTTSNMF VSLPTVM

Sequence ? help Back to Top

Protein Sequence Length: 507 aa Download sequence

MNAASKETMM TSNQTTKMFT YEFPDVDSDL SIFPVPEEDV LGVEHFLEPD FNKCFSGSVL  60
DFNTFHSHKC LSIENFSFAV EFDQIKIDSE SLHSSLTLEG ERTKQEDHDE KSQGTDDVVC  120
SGINKLPATV KSQTADDIFN LAPGSCNASF LGNVNFGSYS QGHDVAFSQN EGKLMISSRT  180
GSSGCSGSST ACLDDENMSD DRPMKRKRLS SCDSSKTGSE LNESKIIPFH EGNKVDTLVT  240
EKRLRKPPRR YSEESIEQKS RSTIKKSAHK ASKDKSLPSE SHRQNHCQKK LKAAPIIHKD  300
KSFNGGCIQV PFGLPIEEGQ VHSAKKRTCW DSEGMKDNRI LCIKDKNDVE SYSAESEDEN  360
TEDECITKGN NTQKGSSRRK HHISWTLSEV MKLVEGVSEY GVGRWTEIKR LQFSSSSHRT  420
SVDLKDKWRN LLKASDTQLQ NRRKVVLGRK QASQQVPESV LRRVRELAAI YPYPRENKSK  480
ESCSSSAPST SSFKTTSNMF VSLPTVM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.2	9e-30	MYB_related family protein