PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022152852.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 333aa MW: 37650.1 Da PI: 7.5178 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 47.3 | 4.8e-15 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+d +++ G+g +W + + + g++R++k+c++rw++yl XP_022152852.1 14 KGPWSPEEDAKLKDFIHKNGTGgNWIALPLKAGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP | |||||||
2 | Myb_DNA-binding | 40.8 | 5.1e-13 | 69 | 111 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +T+eEd ++ ++ G++ W+ Ia ++ gRt++++k++w++ XP_022152852.1 69 GGFTEEEDRIICTLFSTIGSR-WSIIATQLP-GRTDNDIKNHWNS 111 569******************.*********.***********96 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 333 aa Download sequence |
MGRSPCCDKA NVKKGPWSPE EDAKLKDFIH KNGTGGNWIA LPLKAGLKRC GKSCRLRWLN 60 YLRPNIKHGG FTEEEDRIIC TLFSTIGSRW SIIATQLPGR TDNDIKNHWN SKLKKKLMGR 120 STMEEKKPQI MSILPNSHQQ ASPFPLSHDQ PLQSLICKDF NVNYNYNLSP PPQGIDQTLI 180 SIPSTNWSNH FQSNNGQTLS CLFQQAQESC CLMHHNHHHE YPPQAKERLL GFGRSEGSCS 240 SSDGSSTQIS SSGIMGFHQN QGYDSNYCNV FGEELQQQQP LWNCDVEEDV HNDNGFFQVL 300 LFLIHGEREP VQEGDSSTSQ ASAGERYRVR GQW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G57620.1 | 4e-75 | MYB family protein |