PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022152694.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 249aa MW: 27918.5 Da PI: 7.8816 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 55 | 1.4e-17 | 121 | 175 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++++eq Lee F++++ + +++ eLAk+l+L rqV vWFqNrRa+ k XP_022152694.1 121 RKKLRLSREQSAFLEESFKEHHSLYPKQKVELAKRLNLRPRQVEVWFQNRRARTK 175 677889***********************************************98 PP | |||||||
2 | HD-ZIP_I/II | 116.8 | 1.3e-37 | 121 | 210 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 +kk+rls+eq+++LEesF+e++ L p++Kvela++L+l+prqv+vWFqnrRARtk+kq+E+++e+Lk+++++l+++n++L ke ++L+ +l XP_022152694.1 121 RKKLRLSREQSAFLEESFKEHHSLYPKQKVELAKRLNLRPRQVEVWFQNRRARTKLKQTEEECEYLKKWCETLSQHNTKLLKELTDLK-AL 210 69************************************************************************************99.55 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence |
MELGLRLGDG SPFGFPKTQN KHPPHPTVSR RGLDFCLVDA NDVVGCFFGP PPPPQLDLLL 60 PRTPLASRPS SETDVSEAAA AEGGGNPLLS ASLEYGGRAA ATRPENSSGD EEEEEQNLGL 120 RKKLRLSREQ SAFLEESFKE HHSLYPKQKV ELAKRLNLRP RQVEVWFQNR RARTKLKQTE 180 EECEYLKKWC ETLSQHNTKL LKELTDLKAL KTTDSLFFHL PPTTLTICTS CQRAAGKHLA 240 DESHAHRTQ |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 170 | 178 | RRARTKLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06710.1 | 4e-53 | HD-ZIP family protein |