PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022152602.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family MIKC_MADS
Protein Properties Length: 251aa    MW: 28536.6 Da    PI: 6.3702
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022152602.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF88.43.9e-28959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    krien   rqvtfskRr+g+lKKA+EL +LCdaevaviifs+tgkl+e+ss
  XP_022152602.1  9 KRIENANSRQVTFSKRRAGLLKKAQELAILCDAEVAVIIFSNTGKLFEFSS 59
                    79***********************************************96 PP

2K-box68.22.7e-238617214100
           K-box  14 aeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100
                     +++ ++e++ L++ei +Lq +q +llG+dL+ L +keLq+LeqqL+++l  +++kK++ll+eq+e+++ +e+++  en++Lr++++e
  XP_022152602.1  86 EKQEHEEVDILRDEITTLQMKQLQLLGKDLTGLGFKELQNLEQQLNEGLLMVKEKKEQLLMEQLEQSRVQEQRAMLENETLRRQVNE 172
                     456789*****************************************************************************9976 PP

Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    
MGRGKIEIKR IENANSRQVT FSKRRAGLLK KAQELAILCD AEVAVIIFSN TGKLFEFSSS  60
GMKHTLSRYN RCVDSSEAAV DGRKVEKQEH EEVDILRDEI TTLQMKQLQL LGKDLTGLGF  120
KELQNLEQQL NEGLLMVKEK KEQLLMEQLE QSRVQEQRAM LENETLRRQV NELRCLFPPV  180
DCPLPAYLEY CSLEQKNIGL RSPDAACNSE IERGDSDTTL HLGLPSHVYC KRKEAERDTH  240
SNNSGSQMGL L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13790.13e-70MIKC_MADS family protein