PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022152219.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family MIKC_MADS
Protein Properties Length: 288aa    MW: 32644.5 Da    PI: 6.0975
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022152219.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF90.77.5e-292878151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    k+ien   rqvtfskRrng++KKA+ELSvLCdaeva+++fsstg+lye+ss
  XP_022152219.1 28 KKIENINSRQVTFSKRRNGLMKKAKELSVLCDAEVAIVVFSSTGRLYEFSS 78
                    68***********************************************96 PP

2K-box52.81.8e-1811919425100
           K-box  25 kkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100
                     ++ei +L+ +  ++ G++L+ Ls++eLq+Le+qL +++ +i++kK+ llleq+++ + + +++ +en++Lrk+lee
  XP_022152219.1 119 EEEIVKLKLSCLQMRGQELDGLSFRELQNLENQLREGIVSIKDKKETLLLEQLQKCRSQGEMVISENETLRKQLEE 194
                     577888888889999**********************************************************987 PP

Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MFGGNENPRE NRPRKSKKGM GRGRVEIKKI ENINSRQVTF SKRRNGLMKK AKELSVLCDA  60
EVAIVVFSST GRLYEFSSTS MEHTLSRYRG QGMELDFPKE TLDHTTKLPP SDSNTKSSEE  120
EIVKLKLSCL QMRGQELDGL SFRELQNLEN QLREGIVSIK DKKETLLLEQ LQKCRSQGEM  180
VISENETLRK QLEELQQRNN TPLPESSPFQ RSYFSDSKTT STNETEAETE AEENDRSEIS  240
LHLGLSLDGQ RKRKRSVEGA TNDTTGSQVD LEGDAILATD ELSHHFGL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11452RKSKKGMGRGRVEIKKIENINSRQVTFSKRRNGLMKKAK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57390.13e-50MIKC_MADS family protein