PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022152219.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 288aa MW: 32644.5 Da PI: 6.0975 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 90.7 | 7.5e-29 | 28 | 78 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+ien rqvtfskRrng++KKA+ELSvLCdaeva+++fsstg+lye+ss XP_022152219.1 28 KKIENINSRQVTFSKRRNGLMKKAKELSVLCDAEVAIVVFSSTGRLYEFSS 78 68***********************************************96 PP | |||||||
2 | K-box | 52.8 | 1.8e-18 | 119 | 194 | 25 | 100 |
K-box 25 kkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 ++ei +L+ + ++ G++L+ Ls++eLq+Le+qL +++ +i++kK+ llleq+++ + + +++ +en++Lrk+lee XP_022152219.1 119 EEEIVKLKLSCLQMRGQELDGLSFRELQNLENQLREGIVSIKDKKETLLLEQLQKCRSQGEMVISENETLRKQLEE 194 577888888889999**********************************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 288 aa Download sequence |
MFGGNENPRE NRPRKSKKGM GRGRVEIKKI ENINSRQVTF SKRRNGLMKK AKELSVLCDA 60 EVAIVVFSST GRLYEFSSTS MEHTLSRYRG QGMELDFPKE TLDHTTKLPP SDSNTKSSEE 120 EIVKLKLSCL QMRGQELDGL SFRELQNLEN QLREGIVSIK DKKETLLLEQ LQKCRSQGEM 180 VISENETLRK QLEELQQRNN TPLPESSPFQ RSYFSDSKTT STNETEAETE AEENDRSEIS 240 LHLGLSLDGQ RKRKRSVEGA TNDTTGSQVD LEGDAILATD ELSHHFGL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 14 | 52 | RKSKKGMGRGRVEIKKIENINSRQVTFSKRRNGLMKKAK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G57390.1 | 3e-50 | MIKC_MADS family protein |