PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022151936.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family MYB
Protein Properties Length: 310aa    MW: 35697.2 Da    PI: 4.9147
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022151936.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding45.91.3e-141360148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g W++eEde+l  +    G g+W+ Iar  g+ R++k+c++rw +yl
   XP_022151936.1 13 KGLWSPEEDEKLMTYMLTNGQGCWTDIARNAGLLRCGKSCRLRWINYL 60
                     678*****************************99************97 PP
2Myb_DNA-binding482.9e-1566110147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rg+++++E+ l+++ + +lG++ W+ Ia++++ gRt++++k++w++ 
   XP_022151936.1  66 RGAFSPQEERLIAHFHSLLGNR-WSQIAARLP-GRTDNEIKNFWNST 110
                      89********************.*********.***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MRKPESANSR LRKGLWSPEE DEKLMTYMLT NGQGCWTDIA RNAGLLRCGK SCRLRWINYL  60
RPDLKRGAFS PQEERLIAHF HSLLGNRWSQ IAARLPGRTD NEIKNFWNST LKKRLKNRSN  120
SSPNPSESHE PRNCSFGEII ENIIPMHEHD NIINDTCMDN SSFPSLASMP PTLFVENNYI  180
PYDPFPLLLD MVGGTTEEGY CVDYKRVLEP KEVRDLCDFS YLPPLGNGDI EEIKVPSIDI  240
KENIENSNNN SDRFNNCCFS YTNEMNFKVE DIFGNNCQSQ LQENLKTGGW DLEGFIQDLS  300
CFPILDFKMD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12870.11e-63MYB family protein