PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022151564.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB

Protein Properties

Length: 376aa MW: 40462.3 Da PI: 5.0862

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022151564.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.2	6.9e-17	56	101	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd +l ++v ++G ++W++Iar + gR++k+c++rw + XP_022151564.1 56 KGPWSPEEDAILSRLVSKFGARNWSLIARGIA-GRSGKSCRLRWCNQ 101 79****************************.*********985 PP
2	Myb_DNA-binding	58	2.2e-18	108	152	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r+++T eEd ++v a++ +G++ W++Iar ++ gRt++ +k++w++ XP_022151564.1 108 RKPFTDEEDRIIVAAHAIHGNK-WAAIARLLP-GRTDNAIKNHWNST 152 789*****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 376 aa Download sequence
MEGTAVAEVD ATAAEGGVDA CDAVTSVADC GSGDDAVPIV GEGEASGGRG GKDRVKGPWS 60 PEEDAILSRL VSKFGARNWS LIARGIAGRS GKSCRLRWCN QLDPSVKRKP FTDEEDRIIV 120 AAHAIHGNKW AAIARLLPGR TDNAIKNHWN STLRRRCTEL ERIKLESGNM VDDASLEKTK 180 GSSEETLSCG DVNSFKSLEA RDACSREHMD DQFEDKVPIA IEGQFSHEVK EQPTLFRPVA 240 RVSAFSVYNP LDGQESLRAF LRPVPMQGPL VQASKPDVEA SKLLEGVYGD RSVPHQCGHG 300 CCESHNQGSP VDSLLGPEFV DFSDPPPSFP SFELAAIATD ISNLAWLKSG LENGSVRAMG 360 DSAGRLNGCQ MQMGRL

Sequence ? help Back to Top

Protein Sequence Length: 376 aa Download sequence

MEGTAVAEVD ATAAEGGVDA CDAVTSVADC GSGDDAVPIV GEGEASGGRG GKDRVKGPWS  60
PEEDAILSRL VSKFGARNWS LIARGIAGRS GKSCRLRWCN QLDPSVKRKP FTDEEDRIIV  120
AAHAIHGNKW AAIARLLPGR TDNAIKNHWN STLRRRCTEL ERIKLESGNM VDDASLEKTK  180
GSSEETLSCG DVNSFKSLEA RDACSREHMD DQFEDKVPIA IEGQFSHEVK EQPTLFRPVA  240
RVSAFSVYNP LDGQESLRAF LRPVPMQGPL VQASKPDVEA SKLLEGVYGD RSVPHQCGHG  300
CCESHNQGSP VDSLLGPEFV DFSDPPPSFP SFELAAIATD ISNLAWLKSG LENGSVRAMG  360
DSAGRLNGCQ MQMGRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G09230.1	3e-99	MYB family protein