PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022151479.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family MYB
Protein Properties Length: 307aa    MW: 34932 Da    PI: 7.2187
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022151479.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.51.5e-082469346
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46
                      WT+eE +++ +a +++      +W ++a++++ g+t  ++   +q 
   XP_022151479.1 24 QWTPEENKRFENALALYDEQtsdRWLKVAAMIP-GKTIGDVMKQYQE 69
                     5*****************99*************.*******999996 PP
2Myb_DNA-binding46.58.3e-15133177347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ +++ + k++G+g+W+ I+r + ++Rt+ q+ s+ qky
   XP_022151479.1 133 PWTEEEHRQFLMGLKKYGKGDWRNISRNFVTTRTPTQVASHAQKY 177
                      7*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MEFLSPASYL RNSYWLFQET KGAQWTPEEN KRFENALALY DEQTSDRWLK VAAMIPGKTI  60
GDVMKQYQEL EEDVSDIEAG LIPIRGYSNR HSFTLDRADS SHGFDDLSHF YGSGVKRGTS  120
NKPSDHERKK GIPWTEEEHR QFLMGLKKYG KGDWRNISRN FVTTRTPTQV ASHAQKYFIR  180
QLTGGKDKRR SSIHDITTVN LPDAKSPSGD SNRPPSPDHP ADAMAAQLHQ LSKMVGKAEQ  240
EYDWKCPNQG TGARVLDSMN SNMFMVMPPD GPQQQEHNLL GGTTINGSAI EPYYTIFQMQ  300
PMHQHHQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38090.11e-109MYB family protein