PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022151332.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

Whirly

Protein Properties

Length: 277aa MW: 31000.5 Da PI: 9.5742

Description

Whirly family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022151332.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Whirly	206.1	4e-64	99	236	1	138
Whirly 1 svyktkaalkvkavrptfealdsgnlklkraGglllelanataerkydWekkqsfalsatevaelvdlaskesceffhdpaakgsneGkvrkalk 95 s+yk+ka l+v+++ p+f+ ldsg++kl+r+G++ll++a+a+++r+ydW++kq+f+ls+te+++l+ l+ ++sceffhdp +++s+eGkvrk lk XP_022151332.1 99 SIYKGKAVLTVEPRPPEFTPLDSGAFKLSREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLIALGLRDSCEFFHDPYKGKSEEGKVRKILK 193 7******************************************************************************************** PP Whirly 96 vePlpdGsGlfvnlsvtnslvkgnesfsvPvskaefavlrsll 138 vePlpdGsG+f+nlsv+n+l++ +es+++P++kae++vl +++ XP_022151332.1 194 VEPLPDGSGHFFNLSVQNKLINMDESIYIPITKAEYTVLVEAF 236 *************************************9988 PP

Sequence ? help Back to Top
Protein Sequence Length: 277 aa Download sequence
MLRLQWLSSS LLPPLLNPEL SPETSHLCPN RRLCTLNSSR PLLTLTATRK PSPKCQYSWS 60 TQQQQPPPSE PGSQAHSFSP QTRAGAAGAL PPRFFVGHSI YKGKAVLTVE PRPPEFTPLD 120 SGAFKLSREG FVLLQFAPAA GVRQYDWSRK QVFSLSVTEL GSLIALGLRD SCEFFHDPYK 180 GKSEEGKVRK ILKVEPLPDG SGHFFNLSVQ NKLINMDESI YIPITKAEYT VLVEAFKFIL 240 PHLMGWHMIS NTMTRAEDSG RVNNANPRYG GDFEWSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G14410.1	1e-111	Whirly family protein