PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022151332.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | Whirly | ||||||||
Protein Properties | Length: 277aa MW: 31000.5 Da PI: 9.5742 | ||||||||
Description | Whirly family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Whirly | 206.1 | 4e-64 | 99 | 236 | 1 | 138 |
Whirly 1 svyktkaalkvkavrptfealdsgnlklkraGglllelanataerkydWekkqsfalsatevaelvdlaskesceffhdpaakgsneGkvrkalk 95 s+yk+ka l+v+++ p+f+ ldsg++kl+r+G++ll++a+a+++r+ydW++kq+f+ls+te+++l+ l+ ++sceffhdp +++s+eGkvrk lk XP_022151332.1 99 SIYKGKAVLTVEPRPPEFTPLDSGAFKLSREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLIALGLRDSCEFFHDPYKGKSEEGKVRKILK 193 7********************************************************************************************** PP Whirly 96 vePlpdGsGlfvnlsvtnslvkgnesfsvPvskaefavlrsll 138 vePlpdGsG+f+nlsv+n+l++ +es+++P++kae++vl +++ XP_022151332.1 194 VEPLPDGSGHFFNLSVQNKLINMDESIYIPITKAEYTVLVEAF 236 ***************************************9988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 277 aa Download sequence |
MLRLQWLSSS LLPPLLNPEL SPETSHLCPN RRLCTLNSSR PLLTLTATRK PSPKCQYSWS 60 TQQQQPPPSE PGSQAHSFSP QTRAGAAGAL PPRFFVGHSI YKGKAVLTVE PRPPEFTPLD 120 SGAFKLSREG FVLLQFAPAA GVRQYDWSRK QVFSLSVTEL GSLIALGLRD SCEFFHDPYK 180 GKSEEGKVRK ILKVEPLPDG SGHFFNLSVQ NKLINMDESI YIPITKAEYT VLVEAFKFIL 240 PHLMGWHMIS NTMTRAEDSG RVNNANPRYG GDFEWSR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G14410.1 | 1e-111 | Whirly family protein |