PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022151251.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

WRKY

Protein Properties

Length: 495aa MW: 54036.8 Da PI: 7.3848

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022151251.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	106.6	1.2e-33	202	258	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +DgynWrKYGqK+vkgsefprsYY+Ct+ +Cpvkkkvers +++v+ei+Y+geHnhe XP_022151251.1 202 NDGYNWRKYGQKQVKGSEFPRSYYKCTHLNCPVKKKVERSL-EGQVTEIIYKGEHNHE 258 8**************************************.*************8 PP
2	WRKY	106.1	1.8e-33	381	439	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK vkg+++prsYY+Ct++gC+v+k+ver+++dpk+v++tYeg+Hnh+ XP_022151251.1 381 LDDGYRWRKYGQKIVKGNPYPRSYYKCTTPGCNVRKHVERASTDPKAVVTTYEGKHNHD 439 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 495 aa Download sequence
MGDDEEEQPP NSPPPKSKAV LSRPTINLPP RTSMESFFGG PGFGFGFSPG PMTLVSSFFS 60 DSDDCKSFSQ LLAGAMASPV AVPPHAPTAL ELKGSAGLDS AGLFSPGQGP FGMTHQQALA 120 QVTMQAAQTY SHKQMEAESF SSSVAPAASA ELSATFPGEK TKDQLMQPPL LNSAVATTES 180 LDISQSDQRL PPSSCNVDRP ANDGYNWRKY GQKQVKGSEF PRSYYKCTHL NCPVKKKVER 240 SLEGQVTEII YKGEHNHERP QLNKRAKDVG NSNGYSSFPG NPELSSQLQS GYLNKSNEQT 300 AVSSIAKKDQ DSSLVTHEQL SGTSDGEGLS EIETGVNQKD EDEPDAKRRN TEVRVSEPAS 360 SHRTLTESRI IVQTTSEVDL LDDGYRWRKY GQKIVKGNPY PRSYYKCTTP GCNVRKHVER 420 ASTDPKAVVT TYEGKHNHDV PAGRTTSHST FNSNVPHLKS QSMVTEKRFS SKNTDSGNSR 480 QQPVGLLRLK EEQIT

Sequence ? help Back to Top

Protein Sequence Length: 495 aa Download sequence

MGDDEEEQPP NSPPPKSKAV LSRPTINLPP RTSMESFFGG PGFGFGFSPG PMTLVSSFFS  60
DSDDCKSFSQ LLAGAMASPV AVPPHAPTAL ELKGSAGLDS AGLFSPGQGP FGMTHQQALA  120
QVTMQAAQTY SHKQMEAESF SSSVAPAASA ELSATFPGEK TKDQLMQPPL LNSAVATTES  180
LDISQSDQRL PPSSCNVDRP ANDGYNWRKY GQKQVKGSEF PRSYYKCTHL NCPVKKKVER  240
SLEGQVTEII YKGEHNHERP QLNKRAKDVG NSNGYSSFPG NPELSSQLQS GYLNKSNEQT  300
AVSSIAKKDQ DSSLVTHEQL SGTSDGEGLS EIETGVNQKD EDEPDAKRRN TEVRVSEPAS  360
SHRTLTESRI IVQTTSEVDL LDDGYRWRKY GQKIVKGNPY PRSYYKCTTP GCNVRKHVER  420
ASTDPKAVVT TYEGKHNHDV PAGRTTSHST FNSNVPHLKS QSMVTEKRFS SKNTDSGNSR  480
QQPVGLLRLK EEQIT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03340.1	1e-136	WRKY family protein