PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022151137.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB

Protein Properties

Length: 472aa MW: 52858.9 Da PI: 7.4493

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022151137.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	44.4	3.8e-14	22	66	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +WT++Ed++l + + ++G+++W+ Ia+++ +t qc+ rw++yl XP_022151137.1 22 SWTQQEDDILREQISLHGTENWAIIASKFK-DKTTRQCRRRWYTYL 66 6**************************9.***********97 PP
2	Myb_DNA-binding	45.2	2.2e-14	72	115	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g W++eEd+ll +a k +G++ W+ Ia+ + gRt++ +k+r+ + XP_022151137.1 72 KGGWSPEEDLLLCEAQKIFGNR-WTEIAKVVS-GRTDNAVKNRFTT 115 688*****************.*****.********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 472 aa Download sequence
MQDTKKKLAT DDSKKKERHI VSWTQQEDDI LREQISLHGT ENWAIIASKF KDKTTRQCRR 60 RWYTYLNSDF KKGGWSPEED LLLCEAQKIF GNRWTEIAKV VSGRTDNAVK NRFTTLCKKR 120 AKYEALAKEN SSSFINYSKK RVLFQNGSNS VSSETPQLVK RMRRAHISDT TEGCSLEDGS 180 KKPCMDHQLR APFAVLVENV HSVDNLAAQL PLNNANEGLS TTAQGNKSEG TFIKKDDPKV 240 TALTQQAELL SSLALKVNTE NTDQSLENAW KILQDFLSRS KGNDIPKYIT PDIEFQVENI 300 KESVEDLRSS NDGSQWRQPS LHESPGSSEY STGSTLVSQT AEEKIGQSQS EIGTHHQEAK 360 FESGSTCTGE QNDFGESEKE IPKKTLEREA FKCCNERKND TIASSFSSSE FSSPMNVIPL 420 FRSLAAGIPS PQFSESERSF LLRTLGVESP SLNPSANPSQ PPPCKRALLQ SL

Sequence ? help Back to Top

Protein Sequence Length: 472 aa Download sequence

MQDTKKKLAT DDSKKKERHI VSWTQQEDDI LREQISLHGT ENWAIIASKF KDKTTRQCRR  60
RWYTYLNSDF KKGGWSPEED LLLCEAQKIF GNRWTEIAKV VSGRTDNAVK NRFTTLCKKR  120
AKYEALAKEN SSSFINYSKK RVLFQNGSNS VSSETPQLVK RMRRAHISDT TEGCSLEDGS  180
KKPCMDHQLR APFAVLVENV HSVDNLAAQL PLNNANEGLS TTAQGNKSEG TFIKKDDPKV  240
TALTQQAELL SSLALKVNTE NTDQSLENAW KILQDFLSRS KGNDIPKYIT PDIEFQVENI  300
KESVEDLRSS NDGSQWRQPS LHESPGSSEY STGSTLVSQT AEEKIGQSQS EIGTHHQEAK  360
FESGSTCTGE QNDFGESEKE IPKKTLEREA FKCCNERKND TIASSFSSSE FSSPMNVIPL  420
FRSLAAGIPS PQFSESERSF LLRTLGVESP SLNPSANPSQ PPPCKRALLQ SL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G14350.1	1e-172	MYB family protein