PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022151136.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 473aa MW: 52930 Da PI: 7.4493 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 44.4 | 3.8e-14 | 22 | 66 | 3 | 48 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +WT++Ed++l + + ++G+++W+ Ia+++ +t qc+ rw++yl XP_022151136.1 22 SWTQQEDDILREQISLHGTENWAIIASKFK-DKTTRQCRRRWYTYL 66 6****************************9.*************97 PP | |||||||
2 | Myb_DNA-binding | 45.2 | 2.2e-14 | 72 | 115 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g W++eEd+ll +a k +G++ W+ Ia+ + gRt++ +k+r+ + XP_022151136.1 72 KGGWSPEEDLLLCEAQKIFGNR-WTEIAKVVS-GRTDNAVKNRFTT 115 688*******************.*********.**********976 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 473 aa Download sequence |
MQDTKKKLAT DDSKKKERHI VSWTQQEDDI LREQISLHGT ENWAIIASKF KDKTTRQCRR 60 RWYTYLNSDF KKGGWSPEED LLLCEAQKIF GNRWTEIAKV VSGRTDNAVK NRFTTLCKKR 120 AKYEALAKEN SSSFINYSKK RVLFQNGSNS VSSETPQLVK RMRRAHISDT TEGCSLEDGS 180 KKPCMDHQLR APFAVLVENV HSVDNLAAQL PLNNANEGLS TTAQGNKSEG TFIKKDDPKV 240 TALTQQAELL SSLALKVNTE NTDQSLENAW KILQDFLSRS KGNDIPKYIT PDIEFQVENI 300 KESVEDLRSS NDGSQWRQPS LHESPGSSEY STGSTLVSQT AEEKIGQSQS EIGTHHQEAK 360 FESGSTCTGE QNDFGESEKE IPKKTLERAE AFKCCNERKN DTIASSFSSS EFSSPMNVIP 420 LFRSLAAGIP SPQFSESERS FLLRTLGVES PSLNPSANPS QPPPCKRALL QSL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G14350.1 | 1e-171 | MYB family protein |