PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022151051.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | YABBY | ||||||||
Protein Properties | Length: 201aa MW: 22299.6 Da PI: 7.382 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 190.3 | 9.3e-59 | 3 | 164 | 2 | 168 |
YABBY 2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsv 96 ++f+ +eq+CyvqC+ C+til+vsvP +sl++ vtv CGhC+sllsvn++ka+ + h+ s+ ++ +e + e ++ k ++ + s+ XP_022151051.1 3 HLFDLPEQICYVQCGICTTILLVSVPCSSLSMAVTVTCGHCSSLLSVNMMKATLV---PLHFLSSIARNVPKESGGEMNSGKFLDSFKASNL--- 91 7899*******************************************99887643...3344456666677666666555555554444333... PP YABBY 97 sseklsenedeevprvpp.virPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihf 168 + ++ +++e +p +pp v++PP krqr+Psayn+fik+ei+r+ka+nP++sh+eaf +aaknWa fP+i XP_022151051.1 92 KFSEYEDDEGGLIPVTPPvVNKPPAKRQRAPSAYNCFIKNEIRRLKAQNPQMSHKEAFRTAAKNWANFPPIQQ 164 33344788888999988879*************************************************9975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 201 aa Download sequence |
MNHLFDLPEQ ICYVQCGICT TILLVSVPCS SLSMAVTVTC GHCSSLLSVN MMKATLVPLH 60 FLSSIARNVP KESGGEMNSG KFLDSFKASN LKFSEYEDDE GGLIPVTPPV VNKPPAKRQR 120 APSAYNCFIK NEIRRLKAQN PQMSHKEAFR TAAKNWANFP PIQQKEDAES CNQIEENGVW 180 DTQMPEVHND GKCSLRHSVL T |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G23420.1 | 4e-62 | YABBY family protein |