PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022150644.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

AP2

Protein Properties

Length: 409aa MW: 45747.2 Da PI: 5.7264

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022150644.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	47.3	5.1e-15	80	139	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d s+n k+ ++++lg ++ +e Aa+ ++ a++k++g XP_022150644.1 80 SIYRGVTRHRWTGRFEAHLWDkSSWNSiqnKKgRQVYLGAYDNEEAAARTYDLAALKYWG 139 57*****************777788866447***********************98 PP
2	AP2	51.8	2.1e-16	182	233	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa+a++ a+ +++g XP_022150644.1 182 SKYRGVARHHHNGRWEARIGRvF---G-SKYLYLGTYNTQEEAAAAYDMAAIEYRG 233 89**99******99966...3.5***********************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 409 aa Download sequence
MRRSPSVSTS SSSSSSCVGG GGFDSNNLNL AAPPRRPQSE KTGAKRRKRN QDDAKCEIEN 60 RNGNNNNSSN NNASSGRRSS IYRGVTRHRW TGRFEAHLWD KSSWNSIQNK KGRQVYLGAY 120 DNEEAAARTY DLAALKYWGP GTTLNFPVES YRNEIEEMRK VTKEEYLASL RRRSSGFSRG 180 VSKYRGVARH HHNGRWEARI GRVFGSKYLY LGTYNTQEEA AAAYDMAAIE YRGVNAVTNF 240 DISNYIGRLE NKSSVFPAAE QPLQPNCSPA SSSEEGEVVQ QQQQQTTMAF SGSPLQFPSM 300 ENSPTTMEED HDLHWSFLDT GFVQVPDLPL EKSGELPDLF FDEIGFEDDI GLIFEASLED 360 ERCGEGGEKL EDVGKMEMMK SDHEERGLFS TTSPSSSSIT TSVSCEFRV

Sequence ? help Back to Top

Protein Sequence Length: 409 aa Download sequence

MRRSPSVSTS SSSSSSCVGG GGFDSNNLNL AAPPRRPQSE KTGAKRRKRN QDDAKCEIEN  60
RNGNNNNSSN NNASSGRRSS IYRGVTRHRW TGRFEAHLWD KSSWNSIQNK KGRQVYLGAY  120
DNEEAAARTY DLAALKYWGP GTTLNFPVES YRNEIEEMRK VTKEEYLASL RRRSSGFSRG  180
VSKYRGVARH HHNGRWEARI GRVFGSKYLY LGTYNTQEEA AAAYDMAAIE YRGVNAVTNF  240
DISNYIGRLE NKSSVFPAAE QPLQPNCSPA SSSEEGEVVQ QQQQQTTMAF SGSPLQFPSM  300
ENSPTTMEED HDLHWSFLDT GFVQVPDLPL EKSGELPDLF FDEIGFEDDI GLIFEASLED  360
ERCGEGGEKL EDVGKMEMMK SDHEERGLFS TTSPSSSSIT TSVSCEFRV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54320.3	2e-94	AP2 family protein