PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022150497.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family LBD
Protein Properties Length: 293aa    MW: 32072.7 Da    PI: 8.9873
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022150497.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26072.87e-23851761197
          DUF260  11 kCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelall 97 
                     +C+++Cv++p++     p++q++++ +++k++G++ + +l++a++++ r+++++sl+yeA+ r+ +PvyG+vg++ ++ ++ +q++++++l+
  XP_022150497.1  85 SCSDECVIRPCLewissPDSQANATIFLAKFYGRAGLFNLITAASQHLRPAIFKSLLYEACGRMVNPVYGSVGLLCSGDWDRCQAAVDAVLT 176
                     8************************************************************************************9998876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MCTRRIAAVS SSASSFAILI LILWVSQIWV CCHCQARASR ILPPPLTGDA KHDASGKNEL  60
VQKYLRGRAS DRHEGFEDSK RRVPSCSDEC VIRPCLEWIS SPDSQANATI FLAKFYGRAG  120
LFNLITAASQ HLRPAIFKSL LYEACGRMVN PVYGSVGLLC SGDWDRCQAA VDAVLTGTMN  180
VETNAPPSNA NVLCCDIRHV CTDTNLAAPG EPRKVKARSR FKKPDHRTKP KSGPAEILGS  240
GSNWAESGAN RQIEMVDALT VNRGKPNRVL RHGSRSERVD NVELELTLNS AQK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67100.15e-49LBD family protein