PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022149998.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 191aa MW: 22008.4 Da PI: 6.7654 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 79.3 | 2.7e-25 | 9 | 58 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krien rqvtf+kRr+g+lKKA+ELSvLCdae+ + ifs +gklye + XP_022149998.1 9 KRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGLFIFSAHGKLYELA 58 79*********************************************965 PP | |||||||
2 | K-box | 46.1 | 2.1e-16 | 85 | 160 | 11 | 87 |
K-box 11 eakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekel 87 e+++ + ++e+++Lk+eie q+ +R+ G + e ++l eL e+qLe + ++Rs+K+++++++ie l+++++e+ XP_022149998.1 85 ENQTLEIKEEVNRLKQEIEV-QKGLRNAFGGGAEGMTLDELDMFEKQLEIWICQVRSTKMKFMCQEIEALKNQMEEN 160 6778899***********95.8899**********************************************988775 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 191 aa Download sequence |
MARGKVQMKR IENPVHRQVT FCKRRAGLLK KAKELSVLCD AEIGLFIFSA HGKLYELATK 60 GTMQGLIERY MNHTSRTQPP DPSIENQTLE IKEEVNRLKQ EIEVQKGLRN AFGGGAEGMT 120 LDELDMFEKQ LEIWICQVRS TKMKFMCQEI EALKNQMEEN IGYTTNIEAV NNNTNFQYPL 180 TIQDELFQLC T |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71692.1 | 1e-63 | MIKC_MADS family protein |