PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022149997.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family MIKC_MADS
Protein Properties Length: 205aa    MW: 23678.4 Da    PI: 7.4082
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022149997.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF79.13.1e-25958150
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                    krien   rqvtf+kRr+g+lKKA+ELSvLCdae+ + ifs +gklye +
  XP_022149997.1  9 KRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGLFIFSAHGKLYELA 58
                    79*********************************************965 PP
2K-box53.69.5e-198517311100
           K-box  11 eakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100
                     e+++ + ++e+++Lk+eie  q+ +R+  G + e ++l eL   e+qLe  + ++Rs+K+++++++ie l+++  +l+  nk+L+ k+ee
  XP_022149997.1  85 ENQTLEIKEEVNRLKQEIEV-QKGLRNAFGGGAEGMTLDELDMFEKQLEIWICQVRSTKMKFMCQEIEALKNQDLMLKAVNKYLHDKMEE 173
                     6778889***********95.8899**************************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    
MARGKVQMKR IENPVHRQVT FCKRRAGLLK KAKELSVLCD AEIGLFIFSA HGKLYELATK  60
GTMQGLIERY MNHTSRTQPP DPSIENQTLE IKEEVNRLKQ EIEVQKGLRN AFGGGAEGMT  120
LDELDMFEKQ LEIWICQVRS TKMKFMCQEI EALKNQDLML KAVNKYLHDK MEENIGYTTN  180
IEAVNNNTNF QYPLTIQDEL FQLCT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71692.12e-71MIKC_MADS family protein