PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022149989.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 227aa MW: 26080.9 Da PI: 9.8438 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 100 | 8.9e-32 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+i+fss+g+lyeys+ XP_022149989.1 9 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSN 59 79***********************************************95 PP | |||||||
2 | K-box | 102.4 | 5.9e-34 | 76 | 177 | 3 | 100 |
K-box 3 kssgksleeakaeslqqelakLkkeienLq....reqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenka 93 +s ++s++e +++++qqe+akL+++i++Lq + Rhl+G++L+ L++keL+qLe++Le+++++iRskK+e+ll++ie+lqk+e el++en + XP_022149989.1 76 SSATSSVTELNTQYYQQESAKLRQQIQMLQnsnsNLVRHLMGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENENVC 170 45566699**********************8766567********************************************************** PP K-box 94 Lrkklee 100 +r+k++e XP_022149989.1 171 IRTKIAE 177 ****986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 227 aa Download sequence |
MGRGKIEIKR IENTTNRQVT FCKRRNGLLK KAYELSVLCD AEVALIVFSS RGRLYEYSNN 60 SIKTTIERYK KACSDSSATS SVTELNTQYY QQESAKLRQQ IQMLQNSNSN LVRHLMGDSL 120 SALTVKELKQ LENRLERGIT RIRSKKHEML LAEIEYLQKR EIELENENVC IRTKIAEVER 180 LQQANMVSGQ ELNAIQALAS RNFFTPNMME GGAVTFSHQD KKMLHLG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G09960.1 | 1e-119 | MIKC_MADS family protein |