PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022149751.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB_related

Protein Properties

Length: 559aa MW: 63225.6 Da PI: 5.3442

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022149751.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	35	3.3e-11	508	556	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 +rW+ E++ l av ++G+g+Wk+I +t + Rt+ ++k++w++ XP_022149751.1 508 KRWSLLEEDTLRAAVDRFGKGNWKLILSTYRdifEERTEVDLKDKWRNM 556 69*********************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 559 aa Download sequence
MDEDVCRWVI EFILRSSMDD ELLKRVLAVI PIPDKDFRLK KTVLLRAIES QTLQAEITEK 60 FLEIFEMIEQ LDKTEGLAMM ESMKAAYCAV AVECTVKYLV GGGVQRYSDA VRRIWRGKVT 120 ELERSGKSEL VSRELKAWKD EVEDALCDKN VRKRLANMNT RNEALKLVTA YLGEAWAVLG 180 PPFLQLSASL MDKSMTNEMQ FLQLDQELGA ADETAIVRKD VGGSSEIELP PQTVNSERLE 240 RQETVQVLSE AATERTNLLN INQDLGINDG SEQSFVAVDT EEVQELATEA AEIQESAVRD 300 GAVPHHANLS RGENAKTSVL PRCKSLASHR RVRGGAKISN LDDLENDTSL GKYSCLDTPE 360 VNRVREALKS SCLELQAVVK DPLPDALRKA EAVACDLAGK NRNHEHSLEE RNDAAATNPA 420 TNKDDEPLQS GNADVENPRH NRQIIVTRPT SIMERNSTAR TYEWDDSIDG APEGKRSSRL 480 HLPSPKRKAI SPLKKYEEIK FIRRRKSKRW SLLEEDTLRA AVDRFGKGNW KLILSTYRDI 540 FEERTEVDLK DKWRNMTRY

Sequence ? help Back to Top

Protein Sequence Length: 559 aa Download sequence

MDEDVCRWVI EFILRSSMDD ELLKRVLAVI PIPDKDFRLK KTVLLRAIES QTLQAEITEK  60
FLEIFEMIEQ LDKTEGLAMM ESMKAAYCAV AVECTVKYLV GGGVQRYSDA VRRIWRGKVT  120
ELERSGKSEL VSRELKAWKD EVEDALCDKN VRKRLANMNT RNEALKLVTA YLGEAWAVLG  180
PPFLQLSASL MDKSMTNEMQ FLQLDQELGA ADETAIVRKD VGGSSEIELP PQTVNSERLE  240
RQETVQVLSE AATERTNLLN INQDLGINDG SEQSFVAVDT EEVQELATEA AEIQESAVRD  300
GAVPHHANLS RGENAKTSVL PRCKSLASHR RVRGGAKISN LDDLENDTSL GKYSCLDTPE  360
VNRVREALKS SCLELQAVVK DPLPDALRKA EAVACDLAGK NRNHEHSLEE RNDAAATNPA  420
TNKDDEPLQS GNADVENPRH NRQIIVTRPT SIMERNSTAR TYEWDDSIDG APEGKRSSRL  480
HLPSPKRKAI SPLKKYEEIK FIRRRKSKRW SLLEEDTLRA AVDRFGKGNW KLILSTYRDI  540
FEERTEVDLK DKWRNMTRY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	486	506	KRKAISPLKKYEEIKFIRRRK
2	503	508	RRRKSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G15720.1	1e-20	MYB_related family protein