PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022149623.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

WRKY

Protein Properties

Length: 353aa MW: 39785.6 Da PI: 9.793

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022149623.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	98.5	4.2e-31	108	165	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +Dg+nWrKYGqK+vkgse+prsYY+Ct+++Cp++k+ve++ +++++ei+Y+++Hnh+k XP_022149623.1 108 EDGFNWRKYGQKVVKGSENPRSYYKCTHQNCPARKQVEKCL-NGRITEIVYKSKHNHPK 165 7**************************************.*************85 PP
2	WRKY	94.7	6.6e-30	228	286	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy WrKYGqK vkg++++rsYY+Ct+ gC v+k++er+++d ++v++tYeg+Hnh+ XP_022149623.1 228 LDDGYWWRKYGQKIVKGNPNARSYYKCTYGGCGVRKHIERASHDLRAVITTYEGKHNHH 286 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 353 aa Download sequence
MAMEFFFSES AMSKPNSSSN PPLLSPPPSS SFFTIPPGLS PSQFLHSPLL LNSSHIPPSP 60 TTGAFSAGAS TGNRDNSGQH QENNIKEEHT HIHNNKLPEF STRNRASEDG FNWRKYGQKV 120 VKGSENPRSY YKCTHQNCPA RKQVEKCLNG RITEIVYKSK HNHPKTEFPT RSSAQNSSVA 180 SIGHDDEFEF DATTWKSESE KEILRGGGSR AVRDQRVVVQ TISNIDKLDD GYWWRKYGQK 240 IVKGNPNARS YYKCTYGGCG VRKHIERASH DLRAVITTYE GKHNHHIPAP REIGFLIISG 300 ETFVAIHGQS SPRITWKWIP SLASHFLVHP SPFFIHPPFQ FHSMAILHSR LEP

Sequence ? help Back to Top

Protein Sequence Length: 353 aa Download sequence

MAMEFFFSES AMSKPNSSSN PPLLSPPPSS SFFTIPPGLS PSQFLHSPLL LNSSHIPPSP  60
TTGAFSAGAS TGNRDNSGQH QENNIKEEHT HIHNNKLPEF STRNRASEDG FNWRKYGQKV  120
VKGSENPRSY YKCTHQNCPA RKQVEKCLNG RITEIVYKSK HNHPKTEFPT RSSAQNSSVA  180
SIGHDDEFEF DATTWKSESE KEILRGGGSR AVRDQRVVVQ TISNIDKLDD GYWWRKYGQK  240
IVKGNPNARS YYKCTYGGCG VRKHIERASH DLRAVITTYE GKHNHHIPAP REIGFLIISG  300
ETFVAIHGQS SPRITWKWIP SLASHFLVHP SPFFIHPPFQ FHSMAILHSR LEP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G07100.1	6e-91	WRKY family protein