PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022149615.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

G2-like

Protein Properties

Length: 356aa MW: 38696.3 Da PI: 8.6312

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022149615.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.9	1.1e-33	31	85	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt eLHerFv+av+qLGG++kAtPkti+++m+vkgLtl+h+kSHLQk+Rl XP_022149615.1 31 KPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRL 85 79****************************************************8 PP
2	Myb_DNA-binding	72.6	6.2e-23	33	84	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++vdav+qlGg+ t+ktI+r mg kg+tl+++ks++qk++ XP_022149615.1 33 RLRWTVELHERFVDAVTQLGGPdkaTPKTIMRVMGvKGLTLYHLKSHLQKFR 84 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 356 aa Download sequence
MFHAPKKPSS INDRPMCVQA DSGLVLTTDP KPRLRWTVEL HERFVDAVTQ LGGPDKATPK 60 TIMRVMGVKG LTLYHLKSHL QKFRLGKQPH KEFNDQSIKD GMRASALELQ RNSGSSSSLM 120 DRSMNEMQME VQRRLHEQIE VQRHLQLRIE AQGKYMQSIL EKACQTLAGE NMAAASGGGG 180 GGSFKTICNN MGTTGNLVSD AAAMGGGAIK DFISPHPNAF PPFQDINIFT TEPPPPALID 240 CLKKPGPFIS GAGKTPIFWP DDLRLQDLGT SPPSLALPPP PPSIGPANLD SLQLEMYESK 300 PSPMLAVGGG DGMNEKKFDM SLKLERPSPH SDDRMNGIGS NNPTMSQLQG RNSSFG

Sequence ? help Back to Top

Protein Sequence Length: 356 aa Download sequence

MFHAPKKPSS INDRPMCVQA DSGLVLTTDP KPRLRWTVEL HERFVDAVTQ LGGPDKATPK  60
TIMRVMGVKG LTLYHLKSHL QKFRLGKQPH KEFNDQSIKD GMRASALELQ RNSGSSSSLM  120
DRSMNEMQME VQRRLHEQIE VQRHLQLRIE AQGKYMQSIL EKACQTLAGE NMAAASGGGG  180
GGSFKTICNN MGTTGNLVSD AAAMGGGAIK DFISPHPNAF PPFQDINIFT TEPPPPALID  240
CLKKPGPFIS GAGKTPIFWP DDLRLQDLGT SPPSLALPPP PPSIGPANLD SLQLEMYESK  300
PSPMLAVGGG DGMNEKKFDM SLKLERPSPH SDDRMNGIGS NNPTMSQLQG RNSSFG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79430.2	1e-105	G2-like family protein