PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022149609.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB

Protein Properties

Length: 307aa MW: 34575.1 Da PI: 4.9041

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022149609.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49	1.4e-15	16	63	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W++ Ed++l+ ++ +G ++W++ ++ g+ R++k+c++rw +yl XP_022149609.1 16 RGPWSPAEDLRLITFIQNHGHDNWRALPKQAGLLRCGKSCRLRWINYL 63 89****************************99**********97 PP
2	Myb_DNA-binding	50.2	5.7e-16	69	114	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+eE++ +++++k +G++ W++Ia+++ gRt++++k+ w+++l XP_022149609.1 69 RGNFTQEEEDTIIKLHKTWGNK-WSKIASRLS-GRTDNEIKNVWNTHL 114 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 307 aa Download sequence
MGKGRAPCCD KNQVKRGPWS PAEDLRLITF IQNHGHDNWR ALPKQAGLLR CGKSCRLRWI 60 NYLRPDVKRG NFTQEEEDTI IKLHKTWGNK WSKIASRLSG RTDNEIKNVW NTHLKKRLSQ 120 SSETTKVIVS DSSGDESKES SSPTTSSSSS SSQTQNSDKN EPPKKQQPEQ QTSSSISSES 180 SNSNSSATPP DIFWPQNPME LDMGIEIPLE CDIEFWNMLD LDNIDHLLDQ SNEVAHGCVE 240 NNGELQNDKW FKYLENELGL DRPPEVGTDE TTATTATTTD EINSAQRLLV DPCIAYFADG 300 FPQQPYT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79180.1	1e-73	MYB family protein