PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022149446.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family B3
Protein Properties Length: 493aa    MW: 55129.5 Da    PI: 8.082
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022149446.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B360.33.2e-19126215198
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     f+k l++s+v +  ++ lp +f++++  +  ++ t++lede gr ++vk+i  k++    l++GW++F  a++L egD++vF+l+g  +f  +v 
  XP_022149446.1 126 FVKSLVRSHVANCFLMGLPGSFCKSYLPV--RDSTMILEDEAGRNFQVKYIAHKTG----LSAGWRQFSAAHRLLEGDVLVFQLVGPAKF--KVY 212
                     89************************644..5669***************655555....************************997777..666 PP

                     EE- CS
              B3  96 vfr 98 
                     v r
  XP_022149446.1 213 VTR 215
                     555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 493 aa     Download sequence    
MDVDFRRKSQ STPARRSSAA AALVVDDDDG GMALSQVVRS PRNRLSSSSG KTRKPMEDNL  60
MVQKVKKRLA DWKTSHAVTG PGGKFMSFEQ NKAAYDDQCS PGEFKSSAVI HALEVRSKLE  120
PEFPSFVKSL VRSHVANCFL MGLPGSFCKS YLPVRDSTMI LEDEAGRNFQ VKYIAHKTGL  180
SAGWRQFSAA HRLLEGDVLV FQLVGPAKFK VYVTRASDVT EVDGALGLLN LESHTRHSDV  240
GKETENKAEV RSDISDKKRA KGALLDSPEK QRKHSPLRSA PRQVAEYSEN TSEVVVSETV  300
EAAFNLFQPA VPFKDIRSFD DFNIVIDGLS INPELPRDLR KRYFKLCCSQ NMFLHENLIQ  360
GMNRNLVTGV ISETITIADC IKASDLSTSR DEFSAWDKTL RAFQLFGMNV GFLRTRLHRL  420
ANLAYESENA LDVRTLVDAK NDQVHVHDEI RNIETKLVEL KEACDRFGAA IDGLDSKAEV  480
YKSKFQEEVS APW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42700.14e-30B3 family protein