PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022149327.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | HB-PHD | ||||||||
Protein Properties | Length: 697aa MW: 76380.6 Da PI: 5.2827 | ||||||||
Description | HB-PHD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 42.8 | 9e-14 | 514 | 564 | 6 | 56 |
S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 ++++ le+L + F++n+yp+++++e LA++lgL+ +qV+ WF N R + XP_022149327.1 514 RLSQPALERLLASFQENQYPKRATKESLAQELGLSLKQVSKWFENTRWSTR 564 678999*****************************************8766 PP | |||||||
2 | PHD | 38 | 3.8e-13 | 160 | 215 | 1 | 51 |
SBTTTSS..TCTTSSEEEBSS.SSSEEETTTSTSSSSHHSHHSS..TBSSHHHHTT CS PHD 1 rCkvCgk..sdeegelvlCdg.CkewfHlkClglkleseekpeg..ewlCeeCkek 51 +C+ Cg+ e++++lCdg C++ fH+ Cl+++l ++++p + wlC+ C++k XP_022149327.1 160 FCAKCGSkeLSLENDIILCDGiCDRGFHQFCLEPPLLNTDIPPDdeGWLCPGCDCK 215 6999**965556********88*******************99999*******985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 697 aa Download sequence |
MGAMVQLSDG RWAGQNWRRA PALAPARNMC GGSGRQTVRV KAGRNAAACN GGPDLEDSET 60 KPLYSLFALR TRTATTTTRR TIDKILLTPP TRSKTRFLFT NTSSDKLKPE KELQRASSEI 120 MRGKLKIRDL FQHLDSLCAE GRLSESLFDS EGQIDSEDIF CAKCGSKELS LENDIILCDG 180 ICDRGFHQFC LEPPLLNTDI PPDDEGWLCP GCDCKDDCLD LLNEFQGSNL SITDGWEKVY 240 PEAAAAAAGQ NSDHALGLPS DDSEDGDYDP DAPDTINQED ESSSDQSSSD ESGYASASEE 300 LEAAPNDDQY LGLPSDDSED DDYEPGAPEL DEGVKQESSG SDFTSDSEDL AALDDGTTPV 360 RNSNGQGSGC GPRTSVLHNE LQSLLESGPD KDGLEPVSGR RQVERLDYKK LHDETYGNVP 420 SDSSDDTFGS ISIDSSDDRG RGSRTRKRSP KNLVPALNGT NDDLKNKKTK RSYKRRTHQK 480 PGAENMKNSV TRTPEDSVKS SSSVRRTASS SNRRLSQPAL ERLLASFQEN QYPKRATKES 540 LAQELGLSLK QVSKWFENTR WSTRHPSSIE SNKAKSALRM GIQSSETSGK LPKPEQESGA 600 CFRDTDNNGA QHQVSPNTDG AVAPCQSGDT RDDKLATQKT TRPESTATKS RKRKGRSDHV 660 ASHSKDRKES QKPPAKSPKV NQIQTADKVR TRRRRSI |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 474 | 478 | KRRTH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G19510.1 | 5e-58 | HB-PHD family protein |