PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022149325.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family HB-PHD
Protein Properties Length: 876aa    MW: 96717 Da    PI: 4.8354
Description HB-PHD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022149325.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox42.41.2e-13693743656
                     S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     ++++  le+L + F++n+yp+++++e LA++lgL+ +qV+ WF N R   +
  XP_022149325.1 693 RLSQPALERLLASFQENQYPKRATKESLAQELGLSLKQVSKWFENTRWSTR 743
                     678999*****************************************8766 PP

2PHD37.65.1e-13339394151
                     SBTTTSS..TCTTSSEEEBSS.SSSEEETTTSTSSSSHHSHHSS..TBSSHHHHTT CS
             PHD   1 rCkvCgk..sdeegelvlCdg.CkewfHlkClglkleseekpeg..ewlCeeCkek 51 
                     +C+ Cg+     e++++lCdg C++ fH+ Cl+++l ++++p +   wlC+ C++k
  XP_022149325.1 339 FCAKCGSkeLSLENDIILCDGiCDRGFHQFCLEPPLLNTDIPPDdeGWLCPGCDCK 394
                     6999**965556********88*******************99999*******985 PP

Sequence ? help Back to Top
Protein Sequence    Length: 876 aa     Download sequence    
MEERHEYTEP RPNNNCEAVQ EAKASVEVLT CFSNEQMHSI PDNQELGTTP ECTSKTAGPD  60
DEKSGVQQNM EEETKELGSG DVLSELPEKN NQTISKLAEI DQVEAGNLLS SDIETENLIL  120
PIELETTTLN ECSELPPEDA NKNSIKQVNP PIEDLTQNTS IQRLETVPIT SVSISQQLGH  180
KDKKILKSKK KNYMLRSLVS SDRVLRSRTQ EKAKAPEPSN ELNKLTAGEG KRKKKKRNIK  240
GKGASGDEFS SIRNRLRYLV NRIKYEQSLI DAYSSEGWKG FSSDKLKPEK ELQRASSEIM  300
RGKLKIRDLF QHLDSLCAEG RLSESLFDSE GQIDSEDIFC AKCGSKELSL ENDIILCDGI  360
CDRGFHQFCL EPPLLNTDIP PDDEGWLCPG CDCKDDCLDL LNEFQGSNLS ITDGWEKVYP  420
EAAAAAAGQN SDHALGLPSD DSEDGDYDPD APDTINQEDE SSSDQSSSDE SGYASASEEL  480
EAAPNDDQYL GLPSDDSEDD DYEPGAPELD EGVKQESSGS DFTSDSEDLA ALDDGTTPVR  540
NSNGQGSGCG PRTSVLHNEL QSLLESGPDK DGLEPVSGRR QVERLDYKKL HDETYGNVPS  600
DSSDDTFGSI SIDSSDDRGR GSRTRKRSPK NLVPALNGTN DDLKNKKTKR SYKRRTHQKP  660
GAENMKNSVT RTPEDSVKSS SSVRRTASSS NRRLSQPALE RLLASFQENQ YPKRATKESL  720
AQELGLSLKQ VSKWFENTRW STRHPSSIES NKAKSALRMG IQSSETSGKL PKPEQESGAC  780
FRDTDNNGAQ HQVSPNTDGA VAPCQSGDTR DDKLATQKTT RPESTATKSR KRKGRSDHVA  840
SHSKDRKESQ KPPAKSPKVN QIQTADKVRT RRRRSI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1231237KRKKKKR
2232237RKKKKR
3653657KRRTH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19510.13e-77HB-PHD family protein