PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022149232.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 219aa MW: 24398.5 Da PI: 6.6911 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 79.7 | 1.9e-25 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+i+n rqvtfskRr g++KKA+EL +LCda++a+i+fs +gkl++ys+ XP_022149232.1 9 KKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYST 59 689**********************************************96 PP | |||||||
2 | K-box | 50.4 | 9.9e-18 | 95 | 172 | 22 | 99 |
K-box 22 akLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 a L +e + +e+Rh+ Ge+L+ L ++eL+qLe+ Le +l+++ ++K+e +l++i ++ke l +en++Lr++++ XP_022149232.1 95 AELAEEFATKTNELRHMRGEELQGLGIEELKQLEKLLEIGLSRVVETKDEKFLKEIGAIKEKEALLMKENQRLRNQMA 172 6677777777899*************************************************************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 219 aa Download sequence |
MTRQKIEIKK IDNIAARQVT FSKRRRGLFK KAHELATLCD ADIALIVFSA SGKLFDYSTS 60 STQELLRRQN MVPENNNFTQ PVAVASSQLG NSVHAELAEE FATKTNELRH MRGEELQGLG 120 IEELKQLEKL LEIGLSRVVE TKDEKFLKEI GAIKEKEALL MKENQRLRNQ MANLNGEQEQ 180 AVIGGHNNSL GSNTSNSSSS ANPNSQHYDS SDISLELGL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22540.1 | 1e-46 | MIKC_MADS family protein |