PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022149189.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

Trihelix

Protein Properties

Length: 390aa MW: 44801.9 Da PI: 4.4706

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022149189.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	48.7	2e-15	155	239	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmre.rgferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 W ++e+ +L++a e+ + +r++l+ W+ev++k++e ++ r+ +qC+++++ l+k+ykk+k + + +sss+++yf++++ XP_022149189.1 155 WNEHETVVLLDAWGERFLQRGRKSLRSEEWQEVAEKVSEvSKIDRTDTQCRNRLDTLKKKYKKEKSKSTEM-GGSSSKWVYFKKMD 239 ***********************************762678*********************996.89999******8 PP

Sequence ? help Back to Top
Protein Sequence Length: 390 aa Download sequence
MDDNGEERYP VSKRYSGNHR ESYGSLPRPK IPRQDASYSR PVSNQYVDDD VEDDDEEDEA 60 LGEEEDENDQ NNGFTHTSEE VDDGDDEDEF DMDEDNKQNN TVKLDDPELE RHPKKRRLKN 120 LVSGYELAPR MPAPSSATPS GQKSYVGGRN SLTDWNEHET VVLLDAWGER FLQRGRKSLR 180 SEEWQEVAEK VSEVSKIDRT DTQCRNRLDT LKKKYKKEKS KSTEMGGSSS KWVYFKKMDM 240 LMASPPHQGG LSCGLDSGEY VFMNPRAYLN RANGFDEMRD SPENSESDDG EEDELDGLPP 300 KKRMCGRNSE DDGSSFRLLA DSIHKFSEIY EKIESSKRQQ MMELEKMRMD FLRDLELQKR 360 QIMERAQAEI AKLRQGDDEE YGASAKSASG

Sequence ? help Back to Top

Protein Sequence Length: 390 aa Download sequence

MDDNGEERYP VSKRYSGNHR ESYGSLPRPK IPRQDASYSR PVSNQYVDDD VEDDDEEDEA  60
LGEEEDENDQ NNGFTHTSEE VDDGDDEDEF DMDEDNKQNN TVKLDDPELE RHPKKRRLKN  120
LVSGYELAPR MPAPSSATPS GQKSYVGGRN SLTDWNEHET VVLLDAWGER FLQRGRKSLR  180
SEEWQEVAEK VSEVSKIDRT DTQCRNRLDT LKKKYKKEKS KSTEMGGSSS KWVYFKKMDM  240
LMASPPHQGG LSCGLDSGEY VFMNPRAYLN RANGFDEMRD SPENSESDDG EEDELDGLPP  300
KKRMCGRNSE DDGSSFRLLA DSIHKFSEIY EKIESSKRQQ MMELEKMRMD FLRDLELQKR  360
QIMERAQAEI AKLRQGDDEE YGASAKSASG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	113	120	PKKRRLKN
2	114	119	KKRRLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24490.1	7e-72	Trihelix family protein