PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022149162.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

Protein Properties

Length: 503aa MW: 56104.9 Da PI: 6.1326

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022149162.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	54.4	2.2e-17	123	212	2	99
EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS B3 2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 +kv++ps+v+ +l lpk f+++h ++++ +ledesg ++e k+ +kk+ l++GW++F a++L +gD++vF+l+ + +l+v + XP_022149162.1 123 IKVMLPSHVTGGFWLGLPKGFCDSHLP--KQDTVFVLEDESGIEYETKYLSEKKG----LSAGWRGFSMAHKLLQGDVIVFHLV--MPNKLMVYI 209 699********************53..36779***********666665....9********************86..677789999 PP E-S CS B3 97 frk 99 +r+ XP_022149162.1 210 VRS 212 886 PP

Sequence ? help Back to Top
Protein Sequence Length: 503 aa Download sequence
MVKTSGEKNQ LKSITVSPHP LHSPAMAIAQ KNAEITALFS PKMNQWRPGK KEKLFRRKTW 60 VSSTQTSTSY DQGAVDSFLL PRSVKCKRTT VDSVYNDLEA QSSVMAQAKE VQAKLSPSCP 120 SLIKVMLPSH VTGGFWLGLP KGFCDSHLPK QDTVFVLEDE SGIEYETKYL SEKKGLSAGW 180 RGFSMAHKLL QGDVIVFHLV MPNKLMVYIV RSNGAAEVDG ALGLKYEACN KQSSLYSKET 240 NIAHVKEEQT TLDIVNSKET NILPVKEEEE DDSPASLAMD INEEHRQTSG HAVLDSEMIS 300 GQEESEDVSK SFGSNPMNGI QLSDSTLDFD KVKSLNDFSI SVNGLIIDSE LSSHIRTKYY 360 DLCCSQKSFL HDHILEGLNY KLVSGIISET INIADAIRAC KITTSQEHLA TWDKTLTAFE 420 ALGMNVGFLR TRIDQLLNLS LKPEKKREAE LKRDLILAER SILMAKIMEG RATVKRLEDE 480 IHSLDTDIGN MEQLFQEVAS VHW

Sequence ? help Back to Top

Protein Sequence Length: 503 aa Download sequence

MVKTSGEKNQ LKSITVSPHP LHSPAMAIAQ KNAEITALFS PKMNQWRPGK KEKLFRRKTW  60
VSSTQTSTSY DQGAVDSFLL PRSVKCKRTT VDSVYNDLEA QSSVMAQAKE VQAKLSPSCP  120
SLIKVMLPSH VTGGFWLGLP KGFCDSHLPK QDTVFVLEDE SGIEYETKYL SEKKGLSAGW  180
RGFSMAHKLL QGDVIVFHLV MPNKLMVYIV RSNGAAEVDG ALGLKYEACN KQSSLYSKET  240
NIAHVKEEQT TLDIVNSKET NILPVKEEEE DDSPASLAMD INEEHRQTSG HAVLDSEMIS  300
GQEESEDVSK SFGSNPMNGI QLSDSTLDFD KVKSLNDFSI SVNGLIIDSE LSSHIRTKYY  360
DLCCSQKSFL HDHILEGLNY KLVSGIISET INIADAIRAC KITTSQEHLA TWDKTLTAFE  420
ALGMNVGFLR TRIDQLLNLS LKPEKKREAE LKRDLILAER SILMAKIMEG RATVKRLEDE  480
IHSLDTDIGN MEQLFQEVAS VHW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G42700.1	6e-37	B3 family protein