PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022149157.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

WRKY

Protein Properties

Length: 443aa MW: 50326.1 Da PI: 5.4969

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022149157.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96.1	2.3e-30	251	310	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt a gCpv+k+v+r+ ed +++++tYeg+Hnh+ XP_022149157.1 251 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApGCPVRKQVQRCLEDMSILITTYEGTHNHP 310 58*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 443 aa Download sequence
MEIDLSLKID HHKGEYWKEK TQQKDEEEEE EEEEEEEEEE EEAYDQEIME KMVEEAVVEA 60 DHHPDLAASS LKVFLPHNIN GGEISELQTE MNRMKEENKL LRKAVEQTMK DYYDLEMKIA 120 VIQQNNLHKK DSRSFLPFNK SHDVPKTDLE LREMAKKRRV IRSPSKDDGM RESELGLSLG 180 LHTNSSTADL EQQDDQREGE ERDKKKQEDL RVPNFNSVQN KPQRPELQGI APPHNRKARV 240 SVRARCEAAT MNDGCQWRKY GQKIAKGNPC PRAYYRCTVA PGCPVRKQVQ RCLEDMSILI 300 TTYEGTHNHP LPVGATAMAS IASAPPSSSS SFMFLNSLPN PNINILNSSS YSTNPNLYPS 360 PSNNWINPSH SYYHTNNHFQ PHDLLKPSED HKPPLTPESV SAIASDPKFR VAVAAAISSL 420 INKDGQHQDG GGEKKKEMGF VVD

Sequence ? help Back to Top

Protein Sequence Length: 443 aa Download sequence

MEIDLSLKID HHKGEYWKEK TQQKDEEEEE EEEEEEEEEE EEAYDQEIME KMVEEAVVEA  60
DHHPDLAASS LKVFLPHNIN GGEISELQTE MNRMKEENKL LRKAVEQTMK DYYDLEMKIA  120
VIQQNNLHKK DSRSFLPFNK SHDVPKTDLE LREMAKKRRV IRSPSKDDGM RESELGLSLG  180
LHTNSSTADL EQQDDQREGE ERDKKKQEDL RVPNFNSVQN KPQRPELQGI APPHNRKARV  240
SVRARCEAAT MNDGCQWRKY GQKIAKGNPC PRAYYRCTVA PGCPVRKQVQ RCLEDMSILI  300
TTYEGTHNHP LPVGATAMAS IASAPPSSSS SFMFLNSLPN PNINILNSSS YSTNPNLYPS  360
PSNNWINPSH SYYHTNNHFQ PHDLLKPSED HKPPLTPESV SAIASDPKFR VAVAAAISSL  420
INKDGQHQDG GGEKKKEMGF VVD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68150.1	7e-69	WRKY family protein