PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022149064.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

bHLH

Protein Properties

Length: 558aa MW: 60131.4 Da PI: 6.6686

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022149064.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	27.4	6.2e-09	377	425	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L+el+P + sk Ka +L + ++Y++sLq XP_022149064.1 377 NSHSLAERVRREKISERMKFLQELVPGC----SKVTGKAVMLDEIINYVQSLQ 425 58***********************9....556***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 558 aa Download sequence
MDIGDTDKFR LESSTGDSIN YSHSMSSDWR FGETTLMNIP MGLVLPGNVD VIRNQDMVGC 60 SSSTAPVVEP FSSTIWEQAA NCQNLGICNI RDQNNCSTSS NTIAISKASG CPVSLSSDID 120 RTLDISWNLS HSRLKGGVYL PNIPGPLPPS LSQLPADSSF IERAARLSCF SGGNFGDIVG 180 HFNIPEPMCA FSRGMGVIPE RRDNISRNGL VSETGGQSQR NMVDSSEASK PVSLTNEHGA 240 TGRTLPESES PLKLNDRGKL AIDGSANDSD KAEFSSGDGS GEPCMLEVTG KELSAKGFGS 300 RKRKRTGQTE LDQANGPLQQ NGVSAKDNID TQRKGDQNPS STTNKGTVKH GKQAPQPSDP 360 PKEEYIHVRA RRGQATNSHS LAERVRREKI SERMKFLQEL VPGCSKVTGK AVMLDEIINY 420 VQSLQRQVEF LSMKLATVNP RLDINIDGLL AKDILQSRAG PSSGFSSHMP ITGPLPSISH 480 HGLIPSSFPA IGSCEMLRST INSQMTPMSG GFKERTQIKN VWDGELQNIV QMSFGMSTPP 540 SCLEIDGSDS PANTKLQS

Sequence ? help Back to Top

Protein Sequence Length: 558 aa Download sequence

MDIGDTDKFR LESSTGDSIN YSHSMSSDWR FGETTLMNIP MGLVLPGNVD VIRNQDMVGC  60
SSSTAPVVEP FSSTIWEQAA NCQNLGICNI RDQNNCSTSS NTIAISKASG CPVSLSSDID  120
RTLDISWNLS HSRLKGGVYL PNIPGPLPPS LSQLPADSSF IERAARLSCF SGGNFGDIVG  180
HFNIPEPMCA FSRGMGVIPE RRDNISRNGL VSETGGQSQR NMVDSSEASK PVSLTNEHGA  240
TGRTLPESES PLKLNDRGKL AIDGSANDSD KAEFSSGDGS GEPCMLEVTG KELSAKGFGS  300
RKRKRTGQTE LDQANGPLQQ NGVSAKDNID TQRKGDQNPS STTNKGTVKH GKQAPQPSDP  360
PKEEYIHVRA RRGQATNSHS LAERVRREKI SERMKFLQEL VPGCSKVTGK AVMLDEIINY  420
VQSLQRQVEF LSMKLATVNP RLDINIDGLL AKDILQSRAG PSSGFSSHMP ITGPLPSISH  480
HGLIPSSFPA IGSCEMLRST INSQMTPMSG GFKERTQIKN VWDGELQNIV QMSFGMSTPP  540
SCLEIDGSDS PANTKLQS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68920.1	1e-100	bHLH family protein