PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022148880.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | ERF | ||||||||
Protein Properties | Length: 190aa MW: 20816.3 Da PI: 9.5541 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 64.6 | 2.1e-20 | 38 | 87 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+W+AeIrdp+ + +r++lg+f+tae Aa a+++a+++++g XP_022148880.1 38 HYRGVRQRP-WGKWAAEIRDPK----KaARVWLGTFDTAEAAAIAYDNAALRFKG 87 7********.**********94....45***********************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 190 aa Download sequence |
MSMCVHAFII KINMSGEEKC LWGSALYYIS IESGRKRHYR GVRQRPWGKW AAEIRDPKKA 60 ARVWLGTFDT AEAAAIAYDN AALRFKGTKA KLNFPERVQG NNTGAEFTGA AAPSSSVGVA 120 IPPPLMPQEE AFPGLHQYAQ LLSSTDADFP YYSSTLLNHP YPSLFSSSSS SSSSSSFNQQ 180 NHFGTRGPTN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13330.1 | 2e-34 | ERF family protein |