PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022148823.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | MYB | ||||||||
Protein Properties | Length: 311aa MW: 34198.1 Da PI: 6.0356 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 44.6 | 3.3e-14 | 20 | 67 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEd++l + G g+W+ +ar g+ R++k+c++rw +yl XP_022148823.1 20 KGLWSPEEDDKLMSYMLNNGQGCWSDVARNAGLQRCGKSCRLRWINYL 67 678*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 50.1 | 6.4e-16 | 73 | 116 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+++++E++l+++++ +lG++ W+ Ia++++ gRt++++k++w++ XP_022148823.1 73 RGAFSPQEEDLILHLHSLLGNR-WSQIAARLP-GRTDNEIKNFWNS 116 89********************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 311 aa Download sequence |
MRKPDQGGAA AAAAAGKLRK GLWSPEEDDK LMSYMLNNGQ GCWSDVARNA GLQRCGKSCR 60 LRWINYLRPD LKRGAFSPQE EDLILHLHSL LGNRWSQIAA RLPGRTDNEI KNFWNSTIKK 120 RLKNLSSTSS PNTSSGSPSG DSKSTLFTGL LSVQDQQGFD FPIYTADPSP SALALDTFPL 180 LATAHGGPFF SAATAPTFTG GIEPALFRDE DSFFNLPLLQ NVNTTEGSLK TETIIKETNH 240 SNYLINNMNS VLPNHNNNNN NNNNPKVESI INGGVGNNNY LQEEFSIGEW DLDDLMKDVP 300 SSFPCLNFQV Q |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G12870.1 | 2e-70 | MYB family protein |