PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022148630.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family B3
Protein Properties Length: 403aa    MW: 45959.4 Da    PI: 7.7719
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022148630.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B350.14.8e-1636121697
                     ..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
              B3   6 tpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                     + ++ l+ + l +p+kfa+++g +   s  +tl  ++g +W + l  ++++++ ++++GW +Fvk + +++g  +vF+++g+s f  ++ +f
  XP_022148630.1  36 VVPSILQDKKLKIPNKFAKKFGDD--LSDLVTLVVPNGYRWVLGL--KRSGRSLWFEDGWHDFVKHHCIQVGQLLVFRFEGNSIF--NFYIF 121
                     3455566677***********988..7889***************..*********************************99999..66655 PP
2B367.81.5e-21305395498
                     E-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
              B3   4 vltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                     v+ +s+v +   l +p kfae++ +g+   s ++tl+++sg++W+v++   + + ++ l++GW +Fv +n+Lke D++vF+l++ ++  l+v++f
  XP_022148630.1 305 VMRQSYVRRGFHLHIPSKFAEKYlKGV---SGDITLQTSSGKQWRVRC--IREGPGTKLSRGWADFVMENDLKEEDVCVFELIDIKDIVLKVTIF 394
                     57899******************7666...348***************..67777789************************9889999999999 PP

                     - CS
              B3  98 r 98 
                     r
  XP_022148630.1 395 R 395
                     8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 403 aa     Download sequence    
MENCVTAMAE SNEPEGAQSF HESSPARRAG LFYKLVVPSI LQDKKLKIPN KFAKKFGDDL  60
SDLVTLVVPN GYRWVLGLKR SGRSLWFEDG WHDFVKHHCI QVGQLLVFRF EGNSIFNFYI  120
FNLTAIPNGP CNTSNTSFEQ IDGEQCPATL GKEAGYEKLI EIFGSSSPDP SPRSSGKKAF  180
CEFPDHQKWH GSLNGTSIKN FMHWFDTESL HPLKDLDKLQ LLKSNRDIGI QFNGDEVSKA  240
RENVDFQFSD ETDEGARKKK LKLEPIDYYN EPLFEKKCGS IPHKITRMGF GVEEFKPGNP  300
FCWIVMRQSY VRRGFHLHIP SKFAEKYLKG VSGDITLQTS SGKQWRVRCI REGPGTKLSR  360
GWADFVMEND LKEEDVCVFE LIDIKDIVLK VTIFRVHGDP TKT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49480.11e-30B3 family protein