PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022148610.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

Protein Properties

Length: 384aa MW: 44140.2 Da PI: 8.79

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022148610.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	44	4e-14	9	81	16	94
EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS B3 16 lvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 ++p +f++ + + s tl+ ++g +W+v l rk ++++++++GW +F + +++g f+vF+++g+s+f +v XP_022148610.1 9 KRIPDTFLRMIRDE--LSAVATLTVPDGHVWRVGL--RKADNKFWFEDGWHGFLEHYSIRVGYFLVFRYEGNSSF--CV 81 579***999744..8889***********..********************************9998..43 PP
2	B3	61.9	1e-19	261	351	4	98
E-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 4 vltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 vl ps+ + ++++lp fae++ +g++ ++l++++gr+W v++ y+ + r l++GW eF+ +n+L egD++vF+l + +e l+v++f XP_022148610.1 261 VLRPSYLYRGCIMYLPSCFAEKNlSGVSG---FIKLQTPDGRQWPVRCLYKVG--RAKLSQGWYEFCLENNLGEGDVCVFELLRMREIVLKVTMF 350 78899****************866743...5***********55555..566*********************98767776777777 PP - CS B3 98 r 98 r XP_022148610.1 351 R 351 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 384 aa Download sequence
MFLSFDQSKR IPDTFLRMIR DELSAVATLT VPDGHVWRVG LRKADNKFWF EDGWHGFLEH 60 YSIRVGYFLV FRYEGNSSFC VFMFNLNTSE INYQSAALGG NQRNNYSIQN RIFEEMEDYD 120 IPEGIPSNQS MNSGSLRNKL FGDEWNLHQS KAASTLQAEY LSTRDIGVQF SAVEVKKSAD 180 EVRFQNLGDD VHRVKKSGSK KRKIDSSEHH PSTHSEDLGD IRFRFYESAS ARKRTVTAEE 240 RERAINAAKA FEPANPFCRV VLRPSYLYRG CIMYLPSCFA EKNLSGVSGF IKLQTPDGRQ 300 WPVRCLYKVG RAKLSQGWYE FCLENNLGEG DVCVFELLRM REIVLKVTMF RVIEDAGRLV 360 NPNPASMMNP PPLRSVTQIK LIRN

Sequence ? help Back to Top

Protein Sequence Length: 384 aa Download sequence

MFLSFDQSKR IPDTFLRMIR DELSAVATLT VPDGHVWRVG LRKADNKFWF EDGWHGFLEH  60
YSIRVGYFLV FRYEGNSSFC VFMFNLNTSE INYQSAALGG NQRNNYSIQN RIFEEMEDYD  120
IPEGIPSNQS MNSGSLRNKL FGDEWNLHQS KAASTLQAEY LSTRDIGVQF SAVEVKKSAD  180
EVRFQNLGDD VHRVKKSGSK KRKIDSSEHH PSTHSEDLGD IRFRFYESAS ARKRTVTAEE  240
RERAINAAKA FEPANPFCRV VLRPSYLYRG CIMYLPSCFA EKNLSGVSGF IKLQTPDGRQ  300
WPVRCLYKVG RAKLSQGWYE FCLENNLGEG DVCVFELLRM REIVLKVTMF RVIEDAGRLV  360
NPNPASMMNP PPLRSVTQIK LIRN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	1e-129	B3 family protein