PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022148584.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

GRF

Protein Properties

Length: 341aa MW: 37377.4 Da PI: 8.0257

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022148584.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	78.4	6.7e-25	95	139	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCs+++++++k+CErH+hrgr+rsrk++e+ XP_022148584.1 95 DPEPGRCRRTDGKKWRCSKDAYPDSKYCERHMHRGRNRSRKPVES 139 79****************************************986 PP
2	QLQ	64.2	3.2e-22	33	69	1	37
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 s+FT +Q+q+L++Q+l++Ky++a++PvPp+L+++iqk XP_022148584.1 33 SPFTVSQWQELEHQALIFKYMMAGLPVPPDLVLPIQK 69 89*********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 341 aa Download sequence
MNSSGGVGED GGRTVVLGGT AATASGMMGM NRSPFTVSQW QELEHQALIF KYMMAGLPVP 60 PDLVLPIQKS FESISHRFFH HPTMAYCSFY GKKVDPEPGR CRRTDGKKWR CSKDAYPDSK 120 YCERHMHRGR NRSRKPVESQ TMTQSSSTVT SLTVTGSSSS SGAGSFHGLP LNPLSNSQGT 180 ATGTSQPHYP LDSIPYGIPS KDYRYLQGLR PEAGVHSFFS EASGSSRAVQ MDPPMDNTWP 240 MMPSRSPSFP ASKSSDNSIF QSGYPQHSFF GGEFASGETL KQEGQSLQPF FDEWPRARES 300 WTGLDDERSN QTSFSTTQLS ISIPMASSDM STTSSKSPHD N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	1e-44	GRF family protein