PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022148577.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | MYB | ||||||||
Protein Properties | Length: 296aa MW: 33818.8 Da PI: 6.4577 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 60.3 | 4.1e-19 | 15 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +lvd+++++G g+W++ ++ g++R++k+c++rw +yl XP_022148577.1 15 KGPWTAEEDRKLVDYIEKHGHGSWRALPKLAGLNRCGKSCRLRWTNYL 62 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 55.3 | 1.5e-17 | 68 | 113 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++ eE+e+++++++ lG++ W+ Ia++++ gRt++++k++w+++l XP_022148577.1 68 RGNFSDEEEEIIINLHAALGNK-WSIIASHLP-GRTDNEIKNFWNTHL 113 89********************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 296 aa Download sequence |
MMPRSPSVDE NGLKKGPWTA EEDRKLVDYI EKHGHGSWRA LPKLAGLNRC GKSCRLRWTN 60 YLRPDIKRGN FSDEEEEIII NLHAALGNKW SIIASHLPGR TDNEIKNFWN THLKKKLLQM 120 GIDPVTHMPR TDHHLNILSN FHHLLSLPSA PWDSPFRLHS EATQLAKVHL LQNLLQILSS 180 HSSDHLFTSN SLFSGQQIPD PIYNLPIGSS LQSFQNLESS QQQPLSRDDY TTSSLGFGND 240 NDRVETFYDM NHSSDSLPNL VSVSPECSKI PTAIKDHWDD CMDDESSYSY WKHVEE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G16770.2 | 3e-93 | MYB family protein |