PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022148180.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

bHLH

Protein Properties

Length: 268aa MW: 29743.8 Da PI: 8.2075

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022148180.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.1	5.8e-12	85	127	7	54
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+++N+++ Lr+++Pk + K++ a+iL A++Y+k+L XP_022148180.1 85 MAERRRRKKLNDRLYMLRSVVPKiS------KMDRASILGDAIDYLKEL 127 79*******************66......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 268 aa Download sequence
MKLGEGSMWT ANLEKLRNKN GEEDIEDGSV DVSRFNYDSD EPNEYNKQED NINAKNCGSN 60 SNANSTVTGG DQKGKKKGLP AKNLMAERRR RKKLNDRLYM LRSVVPKISK MDRASILGDA 120 IDYLKELLQR INDLHNELES TPGSLLQPSA SFHPLTPTPP TLPCRVKEEL CPSSLSSPKT 180 QPARVEVRVR EGRAVNIHMF CSRKPGLLLS TMRALDNLGL DVQQAVISCF NGFALDVFRA 240 EQSKEGQEIL PEQIKAVLLD SAGLHGVI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	75	93	KKKGLPAKNLMAERRRRKK
2	87	94	ERRRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26744.1	1e-102	bHLH family protein