PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022148079.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | Trihelix | ||||||||
Protein Properties | Length: 271aa MW: 31342.4 Da PI: 9.4958 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 49.9 | 8.6e-16 | 17 | 107 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +Wt++ +l+Liea e++ +l+rg+l+ ++W+ev++++ ++r+ r+ +qC+++++ l+k+yk +k+++ + + +p+f+ l+ XP_022148079.1 17 CWTEDDTLTLIEAWGERHLDLNRGNLRHKHWQEVAEAVnsrhgHDRKSLRTNIQCQNRIDTLKKKYKIEKARSLESGGSYVCAWPFFSCLD 107 8*************************************97777777777899*****************9998877667777999998876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 271 aa Download sequence |
MPLSQPSPST LPVRDDCWTE DDTLTLIEAW GERHLDLNRG NLRHKHWQEV AEAVNSRHGH 60 DRKSLRTNIQ CQNRIDTLKK KYKIEKARSL ESGGSYVCAW PFFSCLDDLI GNSHKPSTPA 120 AVSNWKTAPV TTPGFSLFSN VPVGLRSGTK KRRSTHVYRS FCDSYLRRDV NSKEDEGKYG 180 TDSEDSRSLS SPRFNDREVG YRKLARAIGT IADIYERVEV AKQRHMVELE IQRMQFVKEL 240 EYQRMQLLME MQLQIQKIKR ARRDSGTDCY S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G58630.1 | 3e-54 | Trihelix family protein |