PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022148078.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family Trihelix
Protein Properties Length: 272aa    MW: 31622.7 Da    PI: 9.6633
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022148078.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix49.88.7e-1617107186
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                     +Wt++ +l+Liea  e++ +l+rg+l+ ++W+ev++++     ++r+  r+ +qC+++++ l+k+yk +k+++ +     +  +p+f+ l+
  XP_022148078.1  17 CWTEDDTLTLIEAWGERHLDLNRGNLRHKHWQEVAEAVnsrhgHDRKSLRTNIQCQNRIDTLKKKYKIEKARSLESGGSYVCAWPFFSCLD 107
                     8*************************************97777777777899*****************9998877667777999998876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    
MPLSQPSPST LPVRDDCWTE DDTLTLIEAW GERHLDLNRG NLRHKHWQEV AEAVNSRHGH  60
DRKSLRTNIQ CQNRIDTLKK KYKIEKARSL ESGGSYVCAW PFFSCLDDLI GNSHKPSTPA  120
AVSNWKTAPV TTPGFSLFSN VPVGLRSGTK KRRSTHVYRS FCDSYLRRDV NSKEDEGKYG  180
TDSEDSRSLS SPRFNDREVG YRKLARAIGT IADIYERVEV AKQRHMVELE IQRMQFVKEL  240
EYQRMQLLME MQLQIQKIKR ARRDSGTDNW WF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58630.15e-54Trihelix family protein