PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022147986.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

WRKY

Protein Properties

Length: 309aa MW: 34795.6 Da PI: 8.2064

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022147986.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	104.6	5.2e-33	162	219	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK vk+s++prsYYrCts++C vkk+vers +dp+vv++tYeg+Hnh+ XP_022147986.1 162 EDGYRWRKYGQKAVKNSPYPRSYYRCTSQKCLVKKRVERSYQDPSVVITTYEGQHNHH 219 8********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 309 aa Download sequence
MSNDEGKNLY QQYDPFHYNQ LDMNRSIFHQ QALDPAFMSF TNFFDTSLDY NSLSRAFDVS 60 CSSSEVISPV DDKSKSGGVG GKSLIKQSST TTPNSSVSSS SNEAAAAEED SFKSNKEDTK 120 GSENNKDEEK SKKQKMMLKK KEKRQREPRF AFLTKSEIDH LEDGYRWRKY GQKAVKNSPY 180 PRSYYRCTSQ KCLVKKRVER SYQDPSVVIT TYEGQHNHHC PATLRGHSVG MMPSPFYASA 240 SASALASASA ASSGPTLPQE LFSHLLPITS CQTDPVGSMM YQNLNLQQHL QNMPDHYGLL 300 QDLFTDHQK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	141	146	KEKRQR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G29860.1	4e-46	WRKY family protein