PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022147619.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family HD-ZIP
Protein Properties Length: 840aa    MW: 92591.1 Da    PI: 6.5036
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022147619.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.41.2e-181775357
                    --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                    k  ++t+eq+e+Le+l++++++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  XP_022147619.1 17 KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 75
                    5679*****************************************************97 PP
2START179.32.3e-561613692205
                     HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlm 94 
                     +aee+++e+++ka+ ++  Wv+++ +++g++++ +++ s++++g a+ra+g+v  +++  v+e+l+d + W ++++++++l+v+ ++  g+++l 
  XP_022147619.1 161 IAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCPGVAARACGLVGLEPT-RVAEILKDQPSWFRDCRAVDVLNVLPTAngGTIELL 254
                     789*******************************************************.9999999999****************9999****** PP

                     EEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHH CS
           START  95 vaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslv 185
                     +++l+a+++l+p Rdf+ +Ry+  l++g++vi+ +S+ ++q+ p+    +++vRae+lpSg+li+p+++g+s +++v+h+dl+ ++++++lr+l+
  XP_022147619.1 255 YMQLYAPTTLAPaRDFWLLRYTSVLEDGSLVICVRSLKNTQNGPTmppVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLY 349
                     *******************************************9998899********************************************* PP

                     HHHHHHHHHHHHHHTXXXXX CS
           START 186 ksglaegaktwvatlqrqce 205
                     +s+++ ++k+++a+l+++++
  XP_022147619.1 350 ESSTVLAQKMTMAALRQLRQ 369
                     ****************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 840 aa     Download sequence    
MAMSCKDGNK HGIDNGKYVR YTPEQVEALE RLYHECPKPS SIRRQQLIRE CPILSNIEPK  60
QIKVWFQNRR CREKQRKEAS RLQAVNRKLT AMNKLLMEEN DRLQKQVSQL VYENGYFRQH  120
TQSTTLGAKD TSCEPVVTSG QHNLTSQHPP RDASPAGLLS IAEETLTEFL SKATGTAVEW  180
VQMPGMKPGP DSIGIVAISH GCPGVAARAC GLVGLEPTRV AEILKDQPSW FRDCRAVDVL  240
NVLPTANGGT IELLYMQLYA PTTLAPARDF WLLRYTSVLE DGSLVICVRS LKNTQNGPTM  300
PPVQHFVRAE MLPSGYLIRP CEGGGSIIHI VDHMDLEPWS VPEVLRPLYE SSTVLAQKMT  360
MAALRQLRQI AHEVSQSNVT GWGRRPAALR ALGQRLTRGF NEALNGFNDE GWSVMGNDGM  420
DDVTILVNSS PDKLMGLNIS FANGFSAISN AVLCARASML LQNVPPAILL RFLREHRSEW  480
ADNNIDAYSA AAVKVGPWSL PGSRVGSFGN QVILPLAHTI EHEEFLEVIK LEGVGHTPED  540
AMMPREMFLL QLCSGMDENA IGTCAELIFA PIDASFADDA PLLPSGFRII PLDSGKEASS  600
PNRTLDLASA LEIGPAGNRA SNDCANSGCT RSVMTIAFEF AYESHMQEHV ASMARQYVRS  660
IISSVQRVAL ALSPSHLSSH AGLRSPLGTP EAQTLARWIC NSYRCYLGVE LLKSGNEGGE  720
FVLKTLWHHS DAIMCCSLKS MQALPVFTFA NQAGLDMLET TLVALQDITL EKIFDDHGKK  780
TLCSEFPQIM QQGFACLQGG ICLSSMGRPV SYERAVAWKV LNEEENAHCI CFMFVNWSFV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G52150.10.0HD-ZIP family protein