PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022147399.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 220aa MW: 25129.6 Da PI: 9.6417 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 95.1 | 3.1e-30 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 rien + rqvtfskRrng+lKKA+ELSvLCdaeva+ii+ss+gklye++s XP_022147399.1 10 RIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIYSSRGKLYEFAS 59 8***********************************************86 PP | |||||||
2 | K-box | 64.2 | 4.7e-22 | 83 | 169 | 9 | 97 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 + +++ ++ q+e+a L keie+L+ ++R+llGe+L+s s +eL+q+eqqLe+sl+++R++K +++eqie+l +kek l en +L +k XP_022147399.1 83 VRQHTLQTVQHEAATLVKEIESLEVSKRKLLGEGLGSSSCEELHQIEQQLERSLTNVRARK--VYREQIEQLGEKEKFLAAENAKLGEK 169 6677899*****************************************************8..89********************9887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 220 aa Download sequence |
MVRGKTQMRR IENATSRQVT FSKRRNGLLK KAFELSVLCD AEVALIIYSS RGKLYEFASS 60 SMQATVGRYL RHTKETHHLQ PLVRQHTLQT VQHEAATLVK EIESLEVSKR KLLGEGLGSS 120 SCEELHQIEQ QLERSLTNVR ARKVYREQIE QLGEKEKFLA AENAKLGEKY CVQLHHRQSP 180 NEQGEVSPHP ESSSISDVET ELFIGPPESR SLKRRLPLQT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45660.1 | 2e-82 | MIKC_MADS family protein |