PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022147390.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

bHLH

Protein Properties

Length: 616aa MW: 68370.9 Da PI: 6.2974

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022147390.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.4	5.1e-13	445	491	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr ++P+ + K++Ka+ L A+ YI++Lq XP_022147390.1 445 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAIAYINELQ 491 799*********************66......****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 616 aa Download sequence
MKIENGLRSV GGKDEDKTVV AAVLGTRAFN YLMSCSVSNE NLFMAVRNDE NLQNKLSDLV 60 ERPNASNFSW NYAIFWQLSH SKSGEWVLGW GDGSCRDPRD GEETEATQIL SLRLEDDSQQ 120 RMKKRALQKL HMLFGGSDED NYALGLDRVT DTEMFFLASM YFSFPRGEGG PGKCLASGKH 180 IWLLDVLNSP AEYCVRSYLA KSAGIRTVVL VPTDVGVVEL GSVRSVSESL ELVQFIRSLF 240 SSQNSLDRVR SSAPMSMMAE RKDENTPFVS PGIAERAEGG IPKVFGQSLN LGSMGRSHFR 300 EKLAIRKMDE RSWEACANGG RIQFQSPRNG IHSPSLAHVH SLKQGNPTEI YGSPTPPANN 360 NHEQQLVNGV RDDFCRNPYQ SQKLVQMQID FSVATSRPSV VTRVGGDSEH SDVEPQCKEE 420 GLGTDERRPR KRGRKPANGR EEPLNHVEAE RQRREKLNQR FYALRAVVPN ISKMDKASLL 480 GDAIAYINEL QAKVKAMEFE REKSGITSSD ATPSEVNPEI ENKDLYPDVD VDVEASHDGV 540 IVKVSCPLES HPASRVIKAM KDAQINVVDS KLSEENDTVL HTFIIKSPGS EQLTKEQLIA 600 AFSRDSNPLH ALSTVG

Sequence ? help Back to Top

Protein Sequence Length: 616 aa Download sequence

MKIENGLRSV GGKDEDKTVV AAVLGTRAFN YLMSCSVSNE NLFMAVRNDE NLQNKLSDLV  60
ERPNASNFSW NYAIFWQLSH SKSGEWVLGW GDGSCRDPRD GEETEATQIL SLRLEDDSQQ  120
RMKKRALQKL HMLFGGSDED NYALGLDRVT DTEMFFLASM YFSFPRGEGG PGKCLASGKH  180
IWLLDVLNSP AEYCVRSYLA KSAGIRTVVL VPTDVGVVEL GSVRSVSESL ELVQFIRSLF  240
SSQNSLDRVR SSAPMSMMAE RKDENTPFVS PGIAERAEGG IPKVFGQSLN LGSMGRSHFR  300
EKLAIRKMDE RSWEACANGG RIQFQSPRNG IHSPSLAHVH SLKQGNPTEI YGSPTPPANN  360
NHEQQLVNGV RDDFCRNPYQ SQKLVQMQID FSVATSRPSV VTRVGGDSEH SDVEPQCKEE  420
GLGTDERRPR KRGRKPANGR EEPLNHVEAE RQRREKLNQR FYALRAVVPN ISKMDKASLL  480
GDAIAYINEL QAKVKAMEFE REKSGITSSD ATPSEVNPEI ENKDLYPDVD VDVEASHDGV  540
IVKVSCPLES HPASRVIKAM KDAQINVVDS KLSEENDTVL HTFIIKSPGS EQLTKEQLIA  600
AFSRDSNPLH ALSTVG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	427	435	RRPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01260.1	0.0	bHLH family protein