PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022147054.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

bHLH

Protein Properties

Length: 357aa MW: 39745.4 Da PI: 5.4719

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022147054.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.3	2.3e-12	174	225	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ + Lr+l+P + + ++ + a+i A+e++++L+ XP_022147054.1 174 QRMTHIAVERNRRKQMNEHLRVLRSLMPGS---YVQRGDQASIIGGAIEFVRELE 225 79**************************...9***************9995 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
MEKDDNYSSD PMPPSFSSHH HSDLYNQPDP SHHHQDQFMR SRLLETSGEN GAGVLSYFPT 60 NPLPPPPLQP ITSLDKLSFA EVMQFADFGP KLSLNAQTNN NNFIEELNEE AGGIDPVYFL 120 KFPVLNEKSS EEGPGVGGGG GEQEDEENCR NNNGSKNKRK RGRSVKTSEE VESQRMTHIA 180 VERNRRKQMN EHLRVLRSLM PGSYVQRGDQ ASIIGGAIEF VRELEQLLQC LESQKRRRLL 240 GEPPLQGGDL PPQPPYLPPG AESQMFETTT TAAAAGLLRE ETAESKSCLA DVEVKVLGLD 300 AMIKILSRRR PGQLIKAIAA LEDLQLXILH TNITTIEQTV LYSFNVKQAS QDSQRKI

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

MEKDDNYSSD PMPPSFSSHH HSDLYNQPDP SHHHQDQFMR SRLLETSGEN GAGVLSYFPT  60
NPLPPPPLQP ITSLDKLSFA EVMQFADFGP KLSLNAQTNN NNFIEELNEE AGGIDPVYFL  120
KFPVLNEKSS EEGPGVGGGG GEQEDEENCR NNNGSKNKRK RGRSVKTSEE VESQRMTHIA  180
VERNRRKQMN EHLRVLRSLM PGSYVQRGDQ ASIIGGAIEF VRELEQLLQC LESQKRRRLL  240
GEPPLQGGDL PPQPPYLPPG AESQMFETTT TAAAAGLLRE ETAESKSCLA DVEVKVLGLD  300
AMIKILSRRR PGQLIKAIAA LEDLQLXILH TNITTIEQTV LYSFNVKQAS QDSQRKI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	175	186	RMTHIAVERNRR
2	235	239	KRRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24140.1	3e-67	bHLH family protein