PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022146666.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | MYB | ||||||||
Protein Properties | Length: 254aa MW: 28760.4 Da PI: 8.3082 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 45.1 | 2.3e-14 | 14 | 67 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT......-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg......tWktIartmgkgRtlkqcksrwqkyl 48 rg W++eEde+lv+++++ gg +W+++++ g+ R++k+c++rw +yl XP_022146666.1 14 RGLWSPEEDEKLVNCIRRRSGGgnghafSWSSVPKLAGLARCGKSCRLRWINYL 67 788**************999999*****************************97 PP | |||||||
2 | Myb_DNA-binding | 53.4 | 5.7e-17 | 73 | 116 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg++++eE+ +vd+++ lG++ W+ Ia++++ gRt++++k++w++ XP_022146666.1 73 RGSFSAEEERTIVDVHRILGNR-WAQIAKHLP-GRTDNEIKNFWNS 116 899*******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 254 aa Download sequence |
MGHGGWCRKV KVKRGLWSPE EDEKLVNCIR RRSGGGNGHA FSWSSVPKLA GLARCGKSCR 60 LRWINYLRPD LKRGSFSAEE ERTIVDVHRI LGNRWAQIAK HLPGRTDNEI KNFWNSCIKK 120 KLLAQGLDPN THNLLRPPPP PPQPTLISSS SSNNNTTCPV GAIPVHLAGD PARPTTYNNC 180 INTATNPSQQ LHRMWELDDI TLEPHPAYDH HVPAPAQLKD FDFDFDFIHD FQEDSVMDVI 240 PNSLLNYNHH PDYQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G12720.1 | 1e-64 | MYB family protein |